Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01688 ATGTTTCATTCAGGGTCTGGGTCAGAGGGTCAGAAAAAGTCTGTCAAAAAACCCGGACAGGCTAGCTCGAGAAAAGGGTGCATGAGAGGGAAAGGAGGCCCTCAGAATGCTATGTGCACCTACAAAGGTGTGCGCCAGAGAACTTGGGGGAAGTGGGTGGCAGAAATCCGCGAGCCGAATCGTGGTGCTCGTCTTTGGCTTGGGACGTTCGATACGTCACATGATGCTGCCATGGCTTACGATGCTGCTGCACGTAAGCTTTATGGTCCAGATGCGAAGCTCAATCTACCTGAAAATCAGCAGATATCGTCTGTCATAGGCAGTAGCAGTTCGTTTTATCCTCACTCTGCATTCATCACTACCAGCAGCTCCGATTTCCATGGCTTTCCACAAATGAGGAACTGCGAAACCCAGCTTCTGCAACCTGATTATGGTCATCTTTTTAAAGTGTCAGTTTCAGGTACCAACAATGCTGCATGTTCTTTCATCACAAACACATCTCCAGTCATGGCAAATGATCAGGTTGTACCAATGTATACAAGTGACCCAATTGTTTCTATTCCCTTTGAAAACAATTGTTATAACATGAATGCTGGTAGACCTGTGGAAAACCATATGATGCCCAATGAAAATGAAGAGGGGTATCGTCCATTCTGGAGCACCATGAACGAGAACTTGCCGCTGTATGATGAGACTATCTGGATAGAGGCAGCCATGTCCCTTGATTTTTCGTTCTTGGAAAATATCAAGACCTTCGCCGATGGGAACAACAAGTAG 777 0.4633 MFHSGSGSEGQKKSVKKPGQASSRKGCMRGKGGPQNAMCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAMAYDAAARKLYGPDAKLNLPENQQISSVIGSSSSFYPHSAFITTSSSDFHGFPQMRNCETQLLQPDYGHLFKVSVSGTNNAACSFITNTSPVMANDQVVPMYTSDPIVSIPFENNCYNMNAGRPVENHMMPNENEEGYRPFWSTMNENLPLYDETIWIEAAMSLDFSFLENIKTFADGNNK* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01688 258 CDD AP2 39 99 IPR001471 GO:0003700|GO:0006355
Pte17g01688 258 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Pte17g01688 258 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Pte17g01688 258 Pfam AP2 domain 40 89 IPR001471 GO:0003700|GO:0006355
Pte17g01688 258 MobiDBLite consensus disorder prediction 1 17 - -
Pte17g01688 258 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 14 211 - -
Pte17g01688 258 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Pte17g01688 258 MobiDBLite consensus disorder prediction 1 39 - -
Pte17g01688 258 Gene3D AP2/ERF domain 40 98 IPR036955 GO:0003700|GO:0006355
Pte17g01688 258 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Pte17g01688 258 FunFam Ethylene-responsive transcription factor 2 39 98 - -
Pte17g01688 258 SUPERFAMILY DNA-binding domain 40 98 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01688 Pte-Chr17 30665864 30666640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01688 20 99 AP2-EREBP Transcription Factor Family AT1G75490 88.750 1.57e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte17g01688 AP2 5.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01688 - - gmx:100797850 241.506