Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01674 ATGGCGAATTCTAATTTCGACATCCAAGACCTTGCAACTGACAATCATCCTTCATGCAACAATCATAATGAGACAATAATAGTGGAGGGGGCTGGAACAGAGGTCGCGAACAACAGATACGGGCAAGGGAGGTCTGAAACCGAGGCTGGGAGAGGAGGGGCTGGAACGAGAGGCACTCCTACGTCGTTGCAGCAACGGATTCTGCAACAACAACAGGTTCGACTACGGATTCTGCAACAGATCTGCAACGGGTTCGATTTATTACAGACGACAGCCATGGCAGCTCGTTCAAATTTTCTAAAGGCAGTTGCTTTAGTGCTGCTCTTTGTTCAGTATGGTTTAGCCCACCAGGAAATGCATTTAAGCTCTAAAGCCGAATGGCTGGCTCTGTTAGATCTCCGCTCGTCTTTGGGAGTCAGAGGCAAGTACTGGCCTTTGAAGGCCGAGCCTTGTTCTTCATGGATGGGTGTACAATGCCAAAATGACCGAGTTGTTGGTATCAGCTTGTCAGGGTTGAAACGAACTCGGAGTAGGCGTCGAAGTCCTCGGTTTGCTGTGGATTCGCTTGCAAATATGACCCTTTTGGCTTTTTTCAATGCTTCTGGGTTTTTGCTTCAAGGGTCTATTCCTGACTGGTTTGGCCAGCGTGTTGTTGCACTGGAAATGCTTGATCTTAGATCTTGTTCAGTGATTGGTGCAATTCCAGAGTCACTTGGGAATTTGAATAAACTGAAATATCTGTATCTATCTGGTAATAGTCTTACAGGTTCGGTTCCTTCTCAAATGGGACAGCTATCAAGCTTGGCTGTTCTAGATCTTTCACAGAATTCGCTGACTGGAACCATACCTTCATCTTTTTCTGCTCTTGCCAATCTCACAAGGCTTGAACTTTCCTCAAATTTCTTCTCTGGGTCCATTCCACCGGGTCTGGGTTTACTCTCCAAGCTTCAATCATTGAACCTTTCAGACAACAGCCTGGTCGATACGATACCTGTTCAATTGGGTAACCTTTCTCAGTTGGTTGAACTTGACATTAGCAAGAATTTGTTGTCGGGGTCATTGCCTTTGGAATTGAGAGGACTGGGGAATCTGCAGAAGATGTACATTGGAAACAATGAGCTCGAGGGTCGATTGCCAAGTAGTTTATTTTCAAATCTTTCTCAGCTTCAAGTTTTGGTTTTGAGTGGGAACAAATTTGACGGCTCTCTTCCATCAACATTATGGTCAACGCCGAATTTACGCCTTCTTGATGTGTCAAGGAACAACTTCACTGGTACTCTGTCTCTCGGAAATTCCACCGGGGTTGTTTTCAATCTCTCAAACAATTTTTTCTATGGAGTGCTGATTTCTTCTCTTAAAGAGTTCGATGTTATCGATTTGTCCAATAATTATTTCCTGGGTATTACGGGTTACAGTTTGCACAATGCCAGTCTCACCGGAAACTGTCTACAAATGGCTCAGAAACAAAGGCGCTTGGTGGACTGTAGCCAATTTTATGTTCAAAGAGGGTTACCTTTTAATGGTTCCGATGTAAATGAACCAGCTCTGGCGCCATTGCCGGAACCTGAGTCAAGAAGCAACAGAAGACTGGTATTTGTTCTGGCTGGAACATTTGGGGGACTTGGATTCATCGTAGTCGTAGTAGTGGTCCTTGTAATAATAGTCAAAGTTGTCGATAAGGGAGTTGCAAATCAGAGAGGAACAGCAAATGTGCGGCCTGTTCCAGAAGGGGACAATCCTCCGCATACAAAAGATCCAACCCTTGTCTCTGGCATGGCAGAATCATTTACTTATGAGAAGATACTTCAGTCAACTTGTAATTTCAGTGACACCAATCTCATCAAACATGGTCATTCTGGAGACCTTTTTCTTGGTTATTTGGAAAGTGGAATACCTTTAGTCATAAAAAAGGTAGATATACAAATTTTCAGAAAAGAATCTTATGTGATAGAATTGGAAGTATTAAGCAAGATTCAGCATTCAAGATTGGTCCCGCTGTTAGGGCACTGCTTGGAGCATGAAACTGAGAAGTTCTTAATTTACAAACATATGCCAAACGGGGACTTGGCAAACTCCCTGCACAAAATAAGCAATTCAGAAGACAATAAGTTGCAGTGCTTAGATTGGATCACAAGATTAAAAATTGCAACTGGCGCTGCAGAAGCCCTATCTTACCTTCATCATGAGTGCAGTCCCCCCCTTGTTCACAGAGATGTACAAGCTAGCAGCATCTTACTGGATGATAAATTTGAGGTGCGACTTGGAAGCTTAAGCGAGATTCGTCCGCAAGAAGGAGATTCTCACCAGAACGTTGTGGCTAGGTTTTTGAGAAAGCCACAGAACTCTGATCCAGGCACTTCAGGTTCATCATCCACCGGTTATGCATATGATGTGTACTGTTTCGGGAAAGTCTTACTTGAGCTTATAACCGGCAAACTTGGCATCAGCAAATCAGACGATGCAGCTACAAGAGAGTGGTTAGAGCACACACTGTCTCAGATCAGCATATATGATAAGGAGCTGGTGAATAAAATTGTGGATCCCTATCTCATAATAGATGACGATTTACTGGAAGAGGTATGGGCTATGGCTATTGTTGCCAGATCCTGCCTCAATCCCAAGCCTTCGAGACGGCCCTTCATGAGACATGTCCTCAAAGCTCTAGAAAATCCTTTGAAGGTGGTGAGGGAAGAGAATTCAAGCTCCGTAAGATTAAGGACGACTTCATCCAGGAGATCTTGGAGTGCTGCATTCTTTGGTAGTTGGAGACAGAGCTCATCAGAGAGTGCTACTGTTTTAGGCCAGACAATTAGAGAGGGGACAAGTGGATCGAGGCAGTCAGGAAGAGTAGGTTCTCATAACAGCGGTGGAAACGAATTGTCATCTTCTGATAAAAGGTTATCAAATGAAATATTTCCTGAACCAATTGAAATGCAAGACATAGAGTCGTCATTCGAGAAATGA 2964 0.4383 MANSNFDIQDLATDNHPSCNNHNETIIVEGAGTEVANNRYGQGRSETEAGRGGAGTRGTPTSLQQRILQQQQVRLRILQQICNGFDLLQTTAMAARSNFLKAVALVLLFVQYGLAHQEMHLSSKAEWLALLDLRSSLGVRGKYWPLKAEPCSSWMGVQCQNDRVVGISLSGLKRTRSRRRSPRFAVDSLANMTLLAFFNASGFLLQGSIPDWFGQRVVALEMLDLRSCSVIGAIPESLGNLNKLKYLYLSGNSLTGSVPSQMGQLSSLAVLDLSQNSLTGTIPSSFSALANLTRLELSSNFFSGSIPPGLGLLSKLQSLNLSDNSLVDTIPVQLGNLSQLVELDISKNLLSGSLPLELRGLGNLQKMYIGNNELEGRLPSSLFSNLSQLQVLVLSGNKFDGSLPSTLWSTPNLRLLDVSRNNFTGTLSLGNSTGVVFNLSNNFFYGVLISSLKEFDVIDLSNNYFLGITGYSLHNASLTGNCLQMAQKQRRLVDCSQFYVQRGLPFNGSDVNEPALAPLPEPESRSNRRLVFVLAGTFGGLGFIVVVVVVLVIIVKVVDKGVANQRGTANVRPVPEGDNPPHTKDPTLVSGMAESFTYEKILQSTCNFSDTNLIKHGHSGDLFLGYLESGIPLVIKKVDIQIFRKESYVIELEVLSKIQHSRLVPLLGHCLEHETEKFLIYKHMPNGDLANSLHKISNSEDNKLQCLDWITRLKIATGAAEALSYLHHECSPPLVHRDVQASSILLDDKFEVRLGSLSEIRPQEGDSHQNVVARFLRKPQNSDPGTSGSSSTGYAYDVYCFGKVLLELITGKLGISKSDDAATREWLEHTLSQISIYDKELVNKIVDPYLIIDDDLLEEVWAMAIVARSCLNPKPSRRPFMRHVLKALENPLKVVREENSSSVRLRTTSSRRSWSAAFFGSWRQSSSESATVLGQTIREGTSGSRQSGRVGSHNSGGNELSSSDKRLSNEIFPEPIEMQDIESSFEK* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01674 987 Gene3D Ribonuclease Inhibitor 124 282 IPR032675 -
Pte17g01674 987 ProSiteProfiles Protein kinase domain profile. 608 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01674 987 FunFam Predicted protein 579 683 - -
Pte17g01674 987 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 186 282 - -
Pte17g01674 987 FunFam Leucine-rich repeat receptor protein kinase EMS1 283 381 - -
Pte17g01674 987 MobiDBLite consensus disorder prediction 930 987 - -
Pte17g01674 987 Pfam Leucine rich repeat 315 374 IPR001611 GO:0005515
Pte17g01674 987 Pfam Leucine rich repeat 220 278 IPR001611 GO:0005515
Pte17g01674 987 Pfam Leucine rich repeat 378 423 IPR001611 GO:0005515
Pte17g01674 987 Gene3D Phosphorylase Kinase; domain 1 579 683 - -
Pte17g01674 987 Pfam Protein tyrosine and serine/threonine kinase 614 886 IPR001245 GO:0004672|GO:0006468
Pte17g01674 987 MobiDBLite consensus disorder prediction 930 968 - -
Pte17g01674 987 Gene3D Transferase(Phosphotransferase) domain 1 684 911 - -
Pte17g01674 987 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 543 915 - -
Pte17g01674 987 SUPERFAMILY L domain-like 145 428 - -
Pte17g01674 987 FunFam Putative LRR receptor-like serine/threonine-protein kinase 684 908 - -
Pte17g01674 987 Gene3D Ribonuclease Inhibitor 283 378 IPR032675 -
Pte17g01674 987 Gene3D Ribonuclease Inhibitor 379 480 IPR032675 -
Pte17g01674 987 PRINTS Leucine-rich repeat signature 313 326 - -
Pte17g01674 987 PRINTS Leucine-rich repeat signature 268 281 - -
Pte17g01674 987 SUPERFAMILY Protein kinase-like (PK-like) 583 888 IPR011009 -
Pte17g01674 987 SMART LRR_typ_2 313 337 IPR003591 -
Pte17g01674 987 SMART LRR_typ_2 241 265 IPR003591 -
Pte17g01674 987 SMART LRR_typ_2 289 312 IPR003591 -
Pte17g01674 987 SMART LRR_typ_2 386 410 IPR003591 -
Pte17g01674 987 SMART LRR_typ_2 361 385 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01674 Pte-Chr17 30568669 30574614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01674 125 780 Miscellaneous Gene Families AT2G16250 52.819 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Pte17g01674 PK_Tyr_Ser-Thr 4.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01674 - - qsa:O6P43_016173 1132.86