Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01662 ATGGCTGATAAACGCTTTAAGCTTAAACTGAACATTCCTTCATTCCAACTTTGTCGTTCCAAACAATCAATTTCCACTTTTGCTGGAAACACTATAAAATCAGTGCGTCGTTTCAATCCCAAGGCTTTCGACATTAGCTATCCCAACCTCCCTGCTCCACCACCATCAAGTCCTGAACATGAACACATACCTCTCAAGTGCCGCCAACACATCTCCTCGTCAAAGGAAATTTCCATAGGCTGCAGCTGTCGTTCAAAAACATGCACCAAGTACGTCTCAGCCTCCAGCTCAAACTTCAGAACTCGTAGTGACTCTCCAGATAACTGTACTTGGCGCCGAAAGATTCACTGCATAGAGTCCATTCTTGGCGATGAATTACCTTTCCAGCTTGACGGAGAACATAGCATGTATGTGGAAAAGAAGACGGCCAATGCCAGTGTCCACAGGAACACAACAAATACTGGCAAATATTCACAAAGGGAAGAGGAAATTGAATTGGTAGAAGATAATGGAAGCAAAGCTCTGATTTCTACGTCTAGAAGCTATTCGTTTGGCTCTTCTCTCCAAGTGCTAATCAGTAATGCAGGATCACCACAAACTGTGAGCGAAGAATGGAATGAGTTTAAAATTAGAAAGTACAGCAAGAAGATGACGAGCGATAAAGAGTTAGAAAAAGGGGAAAGCCAGGTTTTGTCAAACAAAAGAGGAATTGAGACCAGAATGAAAGTGGGATTCGTGGAACAACATGAAGGGGAGTTGAGAGAGAGCTTTGCAACGGTGAAGAAATCTGATAATCCATGTGAGGACTTCAAGAGTTCTATGCTGGAGATGATAATGGAGAAGGAGTTGTTTGAGACAGAAGAATTGGAGGATCTCTTGCACTGCTTTTTGTCTTTGAACTCTCGCCAGCATCATCCAATCATTGTTCAGGCCTTTACTCATATTTGGGAGTTACTATTTGACGATACCTACTCATTAAAACAAAAGTTGGGTCGATAG 999 0.4234 MADKRFKLKLNIPSFQLCRSKQSISTFAGNTIKSVRRFNPKAFDISYPNLPAPPPSSPEHEHIPLKCRQHISSSKEISIGCSCRSKTCTKYVSASSSNFRTRSDSPDNCTWRRKIHCIESILGDELPFQLDGEHSMYVEKKTANASVHRNTTNTGKYSQREEEIELVEDNGSKALISTSRSYSFGSSLQVLISNAGSPQTVSEEWNEFKIRKYSKKMTSDKELEKGESQVLSNKRGIETRMKVGFVEQHEGELRESFATVKKSDNPCEDFKSSMLEMIMEKELFETEELEDLLHCFLSLNSRQHHPIIVQAFTHIWELLFDDTYSLKQKLGR* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01662 332 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 120 321 IPR038933 GO:0045892
Pte17g01662 332 Pfam Transcriptional repressor, ovate 263 319 IPR006458 -
Pte17g01662 332 ProSiteProfiles OVATE domain profile. 259 318 IPR006458 -
Pte17g01662 332 NCBIfam uncharacterized plant-specific domain TIGR01568 258 319 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01662 Pte-Chr17 30506858 30508478 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte17g01662 Ovate 2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01662 - - tcc:18591363 153.68