Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01648 ATGGTATCCATCAAACAAATTCACCTCTGTCTCTTCGTAATCACCTTCATCTTGCCGCTTGCCAATTCACAGCAAAACTATTCAGGCAATTCGACATTCACCTGCAGGAACAAAGATGAACAAGGACCTTCTCCAGCGTTTCTCTATACTTTCAATGGTATAAACAGGTCCTGCAAGGCCTTCCTCATCTTCAGATCGCGACCTCCGTACAACTCAATTCCTTCCATTTCAAACCTAACCTCTTCAAGTCCTGCAGAGCTATTGAGATTCAACCAAGCCACGCTGTTTCCAACAAATAAAGAGGTGATTGTCCCAGTTGAGTGCTCTTGTACGGACAATGAGGATTACTACCAAGCCGACAGCTCCTACGTCACCAGCAATTATGATTCATACTACACTATAGCATATGACACATATGAGGGATTATCAACCTGCGATTCTTTAAAGCGTGCGAATCCATATAATGAACTTCAAATACATCCTGGTTTGAAATTGCATGTCCTTCTAAGATGTGCTTGCCCGACAAGGAACCAAGTTGCAAGTGGTACCATGTACCTGCTGACTTACCCAGTTTATTTGCAAGATAAAATCGTGGATATCGCCAGAAGATTCAATGTAAGTACACAGAGTCTAGTTCATGCCAACGGGTTCTCTTCAGAAAATTCTGAGGTTATCCCTTTTACAACTATTCTGATTCCTCTCCCGAGTGATCCTTCAGTTTCACAGACGGTGATTCACAATGAACCACCAGGGAATTCACTCTCACCTGCCTCGAGTCCCAAAGGTAACACGAGAAAGAAAAGATTAAACATCGGTATTTCCATTGCTTCCGTTTGTTTGTTATTTATCTTTGCTGGGTTTGGATGTTACCGCTTGACTGCTTTCAAGAAGAGATCAGAAGAAGGGTTGTTTGATAAAGGTACGAAGAGAATTATCAAGTGGGTACCTATAAGCGATATCCGTATCGAAATAGCTAGCATCGAACATGACCTTAAATTGTTCAGATACGAAGAGATTAAGAAGGCCACGGATAACTTCAATGCCAAGAATAAGCTCAAAGGTTCTGTATATAGAGGCGTCTTCAACAAAAAAACCATGGCCGTCAAAGAAGAGAATAGAGATGCATCAGAGGAAGTGAACATGCTCAAGAGGATCAATCATTTCAACTTGACAAAACTTGAAGGTTACTGTGAAAATCATGGATCTTTCTTCCTTGTATTTGAGTACATGGAAGGTGGTTCTCTAAGAGATTGGCTCGACAGAAATGGAACCAACGCGGAGCATCCATATTGGGAAAAGAGGATTCACGTTGCTCTTGATGTTGCAAATGGACTTCACTATCTTCACAACTTTACTAAACCCTGCTATGTGCACAGAAACGTTACTACAAGCAATATTTTACTCAACAGCAATACGAGGGCCAAAATAGCGAATTTCAGTCTTGTGCAAACAGCAGACAGATCTGGTTCGATCACGACGCCAGTGGTAGGAGAGAGGGTTTATATGGCACCTGAGTATTTGGAAGCAGGTCTGGTTTCTACCCAGATGGACGTCTACGCCTTTGGAGTGGTATTGTTCGAACTCATTACAGGCAAAGATCCAATTATCGTGCAAGATGGGAAAGCGGTACCACTTTCAGCAGTCACAATAGCTGTCATGGAAAACAACAACAAAGACGTAGGAATCAATCTGTTTGTTGATCCTAACCTCACGGTAAATGCTGAAGGTTTTCCCTTCCCACTTACAAAGCTCTGTCTAGCGTGCTTGGCACAAGAACCAGCCAAGAGACCAAGCATGGAAGAAGTCGTCTCCAGTTTGTTGAAGATCCATACAATTGCAGTTAAAGGATCTACCAGTTCTTGA 1863 0.4235 MVSIKQIHLCLFVITFILPLANSQQNYSGNSTFTCRNKDEQGPSPAFLYTFNGINRSCKAFLIFRSRPPYNSIPSISNLTSSSPAELLRFNQATLFPTNKEVIVPVECSCTDNEDYYQADSSYVTSNYDSYYTIAYDTYEGLSTCDSLKRANPYNELQIHPGLKLHVLLRCACPTRNQVASGTMYLLTYPVYLQDKIVDIARRFNVSTQSLVHANGFSSENSEVIPFTTILIPLPSDPSVSQTVIHNEPPGNSLSPASSPKGNTRKKRLNIGISIASVCLLFIFAGFGCYRLTAFKKRSEEGLFDKGTKRIIKWVPISDIRIEIASIEHDLKLFRYEEIKKATDNFNAKNKLKGSVYRGVFNKKTMAVKEENRDASEEVNMLKRINHFNLTKLEGYCENHGSFFLVFEYMEGGSLRDWLDRNGTNAEHPYWEKRIHVALDVANGLHYLHNFTKPCYVHRNVTTSNILLNSNTRAKIANFSLVQTADRSGSITTPVVGERVYMAPEYLEAGLVSTQMDVYAFGVVLFELITGKDPIIVQDGKAVPLSAVTIAVMENNNKDVGINLFVDPNLTVNAEGFPFPLTKLCLACLAQEPAKRPSMEEVVSSLLKIHTIAVKGSTSS* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01648 620 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 11 611 - -
Pte17g01648 620 Gene3D Transferase(Phosphotransferase) domain 1 410 617 - -
Pte17g01648 620 Pfam Protein tyrosine and serine/threonine kinase 366 606 IPR001245 GO:0004672|GO:0006468
Pte17g01648 620 FunFam PTI1-like tyrosine-protein kinase 3 410 618 - -
Pte17g01648 620 Gene3D Phosphorylase Kinase; domain 1 320 409 - -
Pte17g01648 620 ProSiteProfiles LysM domain profile. 187 232 IPR018392 -
Pte17g01648 620 ProSiteProfiles Protein kinase domain profile. 295 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01648 620 MobiDBLite consensus disorder prediction 242 262 - -
Pte17g01648 620 SUPERFAMILY Protein kinase-like (PK-like) 328 606 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01648 Pte-Chr17 30399195 30402775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01648 8 609 Receptor kinase-like Gene Family AT2G23770 35.897 3.16e-115 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pte17g01648 PK_Tyr_Ser-Thr 3.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01648 - - qsa:O6P43_016131 687.952