Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01644 ATGCAGCAACCTCTCTTAAGTAGACAACCAAACCTTTCTTCCATGATCACAAGAAAAGCATTTATCATTCTCTTGCTCGATATATTTCTCATTCCTTTCATCAGAGTTCATGCTGACAGCCAATGCCACCAACAAGCATGTGGCGTAAAACACATCCCTTACCCTTTTGGATTCTCCTCTGCCTGCCAAATATGGGCTCTAGACCGAATTTTCAGCCACAAATATGCACTCACTTCATGGAATGCGCTCCTTTTGCAGAACTACAGTTCATCTCTTTCCCCTTGCATGATTCCAATGACTAGTGTGCAGACTCACTTTAAGTCTTCCAACTGTAATTCGAGCAACGAAAATGTTAACTGCTATTCGGAGATGAACAATACACATGGTTTTATGAACAAGGGTGTTTTGGAACAGAGCCAGTGCCAGTACTTAGTATCGTCCATATCAGCCGACAAATCCTCGAACGGTTTGACTACTTCCTCAGATGTACTTTCCTTGGAGATTGAAACACTTGAGCTGGAGTGGTGGCTTGACGAAGACCGCCAGTGTTCTGAGAATGCTGACTGTACACGAATTCAAGAGCCGATGAATAGAAAAGCTGGATATCGTAGCCATTGCAGGTATGGGTTCGAAGGCGATGGCTTTTTGGCTGGGAAGGTTGCCGAAAAGGTCACAAAAAGCACCAAACGTCGGTTATCTGAAGCCACAGGCTGCCTAGGCATTCCCATCTATCCCTACAGAGAAATTGAGAGAGCAACCGAGGGTTTCTCTGAGAAACAGAGATTGGGAACTGGGGCCTATGGGACAGTTTATGCAGGCAAACTTCAAAATGATAAATGGGTTGCCATCAAGAAAATAAAGCACGGAGATACTGACAATATTGAACAAGTAGTGAATGAGATGAAAATCCTCTCCTCGGTCAACCACCCAAATCTAGTTCATCTCTTGGGTTGCTGCATAGAACATGGACAACAAATTCTTGTTTACGAATGCCTAATGGAACTTTATGTCAACATCTTCAAAGGGAGAGAGGTCATGGAAGTTCGCCTCACTATTGCTGTCGAAACTGCTCAGGCCATAGCTCATCTCCACTCAGCTATGATTCCTCCCATTTATCACAGAGATATCAAGTCGAGCAACATACTGGTGGACCACAATTTCAGATCCAAAGTTGCAGACTTTGGTCTTTCAAGGCTCGGTATGACTGAAATATCCTATGTTTCAACTGCACCACAGGGTACTCTAGGATACCTTGATCCGCAATACCATCAGGACTTCCATCTTTCTGATAAAAGCGATGTTTATAGTTTTGGTGTTGTTCTCATTGAGATCATAACAGCAATGAAAGTGATAAACTTCTCGCGACCCCAGAATGAAGTGAATTTGGCTGCGCTTGCCATAGACAAAATCGGTAAAGGGCATTTAAATGAGATGATTGACCCATTCATTGAGTTTCAAAGGGATGCGTGGACATTTTGTTCTGTGCACAAGGTAGCTAAGCTAGCATTTAGATGTCTGGCCTTCCACATGGATATGAGACCTTCCATGAAGGAAGTTGCAGCAGAATTAAAGCAAATAAGGGGTTTCTAG 1590 0.4333 MQQPLLSRQPNLSSMITRKAFIILLLDIFLIPFIRVHADSQCHQQACGVKHIPYPFGFSSACQIWALDRIFSHKYALTSWNALLLQNYSSSLSPCMIPMTSVQTHFKSSNCNSSNENVNCYSEMNNTHGFMNKGVLEQSQCQYLVSSISADKSSNGLTTSSDVLSLEIETLELEWWLDEDRQCSENADCTRIQEPMNRKAGYRSHCRYGFEGDGFLAGKVAEKVTKSTKRRLSEATGCLGIPIYPYREIERATEGFSEKQRLGTGAYGTVYAGKLQNDKWVAIKKIKHGDTDNIEQVVNEMKILSSVNHPNLVHLLGCCIEHGQQILVYECLMELYVNIFKGREVMEVRLTIAVETAQAIAHLHSAMIPPIYHRDIKSSNILVDHNFRSKVADFGLSRLGMTEISYVSTAPQGTLGYLDPQYHQDFHLSDKSDVYSFGVVLIEIITAMKVINFSRPQNEVNLAALAIDKIGKGHLNEMIDPFIEFQRDAWTFCSVHKVAKLAFRCLAFHMDMRPSMKEVAAELKQIRGF* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01644 529 Gene3D Transferase(Phosphotransferase) domain 1 341 528 - -
Pte17g01644 529 FunFam Wall-associated receptor kinase-like 20 336 529 - -
Pte17g01644 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
Pte17g01644 529 FunFam Wall-associated receptor kinase-like 14 223 331 - -
Pte17g01644 529 Gene3D Laminin 174 218 - -
Pte17g01644 529 Pfam Protein kinase domain 256 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01644 529 ProSitePatterns Protein kinases ATP-binding region signature. 262 285 IPR017441 GO:0005524
Pte17g01644 529 ProSiteProfiles Protein kinase domain profile. 256 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01644 529 SUPERFAMILY Protein kinase-like (PK-like) 234 523 IPR011009 -
Pte17g01644 529 Gene3D Phosphorylase Kinase; domain 1 227 331 - -
Pte17g01644 529 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 156 527 IPR044652 GO:0004672
Pte17g01644 529 SMART serkin_6 256 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01644 Pte-Chr17 30365270 30368315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01644 15 527 Receptor kinase-like Gene Family AT2G23450 44.643 5.41e-164 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pte17g01644 Pkinase 3.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01644 - - qsa:O6P43_016118 577.4