Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01624 ATGAATTCTGAGTCACCGCAAGTGGAGCACCAAGTACACGCCACCGCCGATGAAGCAGACCGCTTGTTGCCGTCGCGACCGGACTCGCTATCATTGACGACCACGTCCTCGTCTTCGTCTTCTACCTCATCCGACGAAGATGAGGAGGCTGCTTTCGAACCGCGAAACAAAATATCGATCGTCAATTTGGACTCTGCCGACACCGACGATTCAAACACGGTGCCGCCTTTCTCATGGAGGAAGATGTGGTTGTTCACCGGTCCAGGGTTCTTAATGAGCATTGCATTTCTGGATCCGGGAAATCTTGAAGGAGATCTTCAGTCTGGAGCTATAGCCGGTTACTCGCTTCTCTGGTTGCTGATGTGGGCCACGGTTATGGGATTGCTGATTCAACTCTTGTCCGCTAGAATTGGGGTCGCCACCGGTCAACACCTCGCCGAGCTGTGCAGGGATGAGTATCCCAATTGGGCCAGATACGTGCTCTGGTTCATGGCGGAGTTGGCCTTGATTGGAGCTGATATTCAAGAGGTCATAGGGAGTGCCATTGCTATCCAAATACTGAGTCATGGCGTGTTGCCTCTTTGGGCTGGTGTTCTAATAACCGCCTCCGATTGTGTCATCTTTCTATTTCTTGAGAACTATGGAGTTAGGAAGTTAGAAGCTGCTTTTGCAATTCTCATTGGTACTATGGCACTTTCCTTTGCATGGATGTTTGGTGATGCAAAGCCTAGTGGAAAAGAACTTTTAAAAGGTATTCTGGTTCCTAGACTAAGCTCGAAAACAATTCGCCAGGCTGTAGGTGTTGTGGGCTGTGTTATAATGCCTCACAATGTATTTCTGCATTCTGCTCTGGTGCAGTCAAGGAATGTTGATCCTAACAAGAAAGGTCACGTCCAAGAGGCTCTCAACTATTACTCAATTGAATCATCAGTTGCGCTTTCAATTTCCTTCATGATCAATCTATTTGTAACAACAGTTTTTGCTAAGGGATTTCATGGTAGTAAACAGGCAAATAGCATAGGCTTAGTGAATGCAGGGCAGTATCTAGAGGAGAAGTATGGAGGAGGATTCTTCCCTATACTTTATATATGGGGTATTGGGTTGCTTGCAGCTGGACAGAGCAGTACCATTACTGGCACCTATGCCGGGCAGTTTATAATGGGTGGGTTTCTAAACCTCCGTTTGAAGAAGTGGCTGAGGGCATTGATCACTCGGAGTTTTGCTATTGTGCCAACTATAGTTGTAGCTATCATTTTCAATACATCAGAAGCGTCTCTAGATATATTAAATGAATGGCTAAATGTGCTGCAATCTATACAAATTCCTTTTGCCCTTATTCCTCTTCTCACTTTGGTGACAAAAGAGCAGGTTATGGGGACCTTTAAAATTGGATCACTTCTTGAGAGGATTGCATGGAGTGTGGCGCTACTGGTAATGGTGATTAATGGGTATTTACTGCTAGATTTCTTTCTTTCGGAAGTGAATAGTGTGCGTTTAGGTTTGCTGGTCTGCATCTTCACCGCAGCATACATAGCGTTTATTCTGTATCTAGTTATGCACAGTGGTGTTCTTCCTTCTGCTTGGGTTAGTCCCACCTCCAAGGAGTTATTTGCTGCTGTAAATGGTGCCAAAATTCCTTGTTGA 1644 0.455 MNSESPQVEHQVHATADEADRLLPSRPDSLSLTTTSSSSSSTSSDEDEEAAFEPRNKISIVNLDSADTDDSNTVPPFSWRKMWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATVMGLLIQLLSARIGVATGQHLAELCRDEYPNWARYVLWFMAELALIGADIQEVIGSAIAIQILSHGVLPLWAGVLITASDCVIFLFLENYGVRKLEAAFAILIGTMALSFAWMFGDAKPSGKELLKGILVPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRNVDPNKKGHVQEALNYYSIESSVALSISFMINLFVTTVFAKGFHGSKQANSIGLVNAGQYLEEKYGGGFFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTIVVAIIFNTSEASLDILNEWLNVLQSIQIPFALIPLLTLVTKEQVMGTFKIGSLLERIAWSVALLVMVINGYLLLDFFLSEVNSVRLGLLVCIFTAAYIAFILYLVMHSGVLPSAWVSPTSKELFAAVNGAKIPC* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01624 547 NCBIfam Nramp family divalent metal transporter 87 456 - -
Pte17g01624 547 Hamap Divalent metal cation transporter MntH [mntH]. 67 490 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte17g01624 547 PRINTS Natural resistance-associated macrophage protein signature 191 210 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte17g01624 547 PRINTS Natural resistance-associated macrophage protein signature 400 417 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte17g01624 547 PRINTS Natural resistance-associated macrophage protein signature 265 288 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte17g01624 547 PRINTS Natural resistance-associated macrophage protein signature 434 453 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte17g01624 547 PRINTS Natural resistance-associated macrophage protein signature 216 237 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte17g01624 547 PRINTS Natural resistance-associated macrophage protein signature 161 187 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte17g01624 547 PRINTS Natural resistance-associated macrophage protein signature 372 391 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte17g01624 547 MobiDBLite consensus disorder prediction 27 45 - -
Pte17g01624 547 Pfam Natural resistance-associated macrophage protein 103 464 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte17g01624 547 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 80 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte17g01624 547 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 51 519 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte17g01624 547 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01624 Pte-Chr17 30235320 30238876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01624 44 521 Inorganic Solute Cotransporters AT1G47240 81.002 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01624 K21398 - qsa:O6P43_016014 853.588