Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01616 ATGGAAGCAGGGGAGGATTGCTGTGTGAAAGTAGCAGTCCACGTTCGGCCACTCATCGCTGATGAGAGGACTCAAGGCTGTAAAGATTGTGTTACTGTCGTTCCTGGGAAGCCTCAGATACAAATTGGCACCCATTCATTTACCTTTGATCACGTTTATGGGAGTACTGGTCCTCCCTCATCTTCAATGTTTGAAGAATGCGTTTCTCCTCTGGTTGATGGGCTTTTTCAAGGATACAATGCAACTGTTCTAGCGTATGGTCAGACAGGTTCAGGGAAAACATATACCATGGGAACTGGATTTAAGGACGGTTGCCAAACAGGAATCATCCCTCAAGTTATGGATGTTTTATTCCAAAAGATCGAGACCTTAAAGCACCAGACGGAATTTCAGATGCATGTTTCATTTATTGAGATTCTAAAGGAAGAAGTTCACGATTTGCTGGATCCCTCTTCCATGAGCAAACCTGAAACTGCAAATGGGCATGCAGGAAAAGTAACTATTCCAGGGAAATCACCGATACAAATTCGGGAGACATCAGATGGTGTTATTACACTCTCAGGTTCTACTGAAGTTAGTGTTAGTTCACTGAAAGAAATGGCTGCTTGTCTGGAACAAGGATCATTAAGCAGGGCAACTGGCAGCACAAATATGAATAATCAATCGAGCCGATCCCATGCGATCTTCACAATCACATTGGAGCAAATGCGGAATCTTAATATTCCTAGGCCTAGTGATGGCAGTGTAAATGAGACCATGAATGAAGAATATCTTTGTGCCAAATTGCATTTGGTTGATCTTGCTGGATCTGAGCGTGCGAAAAGAACAGGTTCTGATGGAATGCGTTTCAAGGAAGGAGTTCATATAAACAAAGGCCTTCTTGCTCTTGGTAATGTTATAAGTGCACTTGGAGATGAAAAAAAACGTAAAGAAGGTGTCCATGTGCCATATCGGGACAGTAAACTCACTCGGCTTTTACAGGATTCACTTGGTGGTAACAGCAGAACTGTTATGATAGCCTGCATCAGTCCTGCTGACATTAATGTTGAGGAGACCTTAAACACTTTAAAGTATGCAAATCGAGCACGTAATATTCAAAATAAGCCTGTTGTCAATAGAGATCCCATGTCTAATGAGATGATGAAAATGCGACAGCAACTGGAGTTTTTGCAGGCTGAGCTTTGTTCTCGTTCTGGAGGATCATCTGATGAAGTTCAGGTACTTAAGGAAAGAATTGCTTGGCTCGAAGCTGCTAACGAGGATCTTTGCAGAGAACTTCATGACTGTCGCAATAGAGGCTCCTCTTTTGAACAATTTGCTAAGGACGATCATGATGCAAATCTAGGCCTTAGCAGAGCTGACAGGCTTAAAAATGGGTTGCATATAACAGAATCCACTGATTATCAAATGGGAGAAACAGCAGCAGGGGTTTCAAGGGAAATTGATGAAGAGGTGGTCAAAGAGTGGGAGCATACACTTCTGCAAACTTCTATGGACAAGGAGTTACACGAGTTGAATAAACGTTTGGAGGAGAAAGAGTCTGAGATGAAACTTTTTGGGGGAGTTGACACTGAAGCACTCAAGCAGCACTTTGGGAAGAAGATCACGGAACTAGAAGATGAGAAAAAAGTTGTACAGCAAGAAAGAGATCGTCTTTTAACTGAGGTTGAAAACCTTGCTGCTGGTTCTGACGGACAAACACAAAAATTACAAGATGCCCATTCTCAAAAATTGAAAATGCTTGAAGCACAGATTCTTGATCTGAAGAAGAAACAAGAAAGTCAGGTCCAGCTTGTGAAGCAAAAGCAGAAGAGTGATGAAGCAGCAAAGCGACTGCAGGAGGAAATACAATCCATAAAGGCGCAAAAGGTTCAATTGCAACATAGGATGAAACAAGAAGCTGAACAGTTTCGGCAATGGAAGGCCTCTAGAGAGAGAGAGCTTCTCCAGTTACGGAAAGAGGGAAGGAGAAATGAGTATGAACGGCATAAGCTGCAAGCCCTAAACCAGCGGCAGAAGTTGGTCCTCCAAAGAAAGACTGAAGAAGCTGCAATGGCGACTAAGAGGCTTAAGGAACTCCTAGAGGCTCGTAAATCTTCAAACCGTGACGCTTCAGTTGTTGCCAATGGGCATGTGACAAATGGGCAGAGTAATGAGAAGTCTTTGCAACGATGGCTTGACCACGAGCTAGAAGTCGTGGTGAACGTGCATGAAGTCCGTTTTGAATATGAGAAGCAAAGTCAAGTGCGATCTGCTCTTGCAGAAGAATTAGCCATGCTAAGGCACGTGGATGAGTTTGCTGCAAAGGGCCTCAGTCCTCCGAGAGGAAAGAATGGGATTTCAAGAGTATCCTCCATGTCACCAAATGCAAGGATGTCAAGAATTGCTTCGCTTGAGAACATGCTGAATATATCTTCTAATTCACTGGTAGCTATGGCTTCACAAATTTCTGAGGCGGAAGAGAGAGAACGGGCATTCTCTAATCGAGGACGTTGGAACCAGTTGCGCTCTATGGGAGAAGCCAAGTCTCTACTTCAATACATGTTTAATTCCTTGGCAGATTCAAGGTGCCAAGTATGGGAGAAGGAAGTAGAGATCAGGGAAATGAAAGAACATATTAAAGAGCTTGTCGGTCTATTGCGGCAAAGTGAGACAAGAAGGAAGGAAGTTGAGAAGGAGCTCAAATGTAGAGAGCAAGCTATTGGAGCTGAATTGGCTACACCAGCTTCGGGAAACTTCCAGAATTCTTTGAAACATTTTGCTGAGGACATGAGTGGCCCTTTGTCGCCAAATTCTGTACCAGCACCTAAGCAGCTAAGATACAGCGCAGGCATTATCAACGGATCTACAAGAGACTCAGCAGCATTCATAGACCAGAACAGAAAGATGATACCTATTGGCCAACTCCCAACGAAGAAGTTAGCAATCATTGGACACGGTTCTGGAAAGTTATGGAGATGGAAAAGAAGTCACCATCAGTGGCTATTACAGTTCAAGTGGAAGTGGCAGAAGCCCTGGAGAATTTCAGAATTGATTCGGCAGAGTGATGAAACCATCATGAGAGCAAAGCCTCGTCCTCATGCTCTACCACGTACGGTGTGA 3102 0.4368 MEAGEDCCVKVAVHVRPLIADERTQGCKDCVTVVPGKPQIQIGTHSFTFDHVYGSTGPPSSSMFEECVSPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIIPQVMDVLFQKIETLKHQTEFQMHVSFIEILKEEVHDLLDPSSMSKPETANGHAGKVTIPGKSPIQIRETSDGVITLSGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRNLNIPRPSDGSVNETMNEEYLCAKLHLVDLAGSERAKRTGSDGMRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINVEETLNTLKYANRARNIQNKPVVNRDPMSNEMMKMRQQLEFLQAELCSRSGGSSDEVQVLKERIAWLEAANEDLCRELHDCRNRGSSFEQFAKDDHDANLGLSRADRLKNGLHITESTDYQMGETAAGVSREIDEEVVKEWEHTLLQTSMDKELHELNKRLEEKESEMKLFGGVDTEALKQHFGKKITELEDEKKVVQQERDRLLTEVENLAAGSDGQTQKLQDAHSQKLKMLEAQILDLKKKQESQVQLVKQKQKSDEAAKRLQEEIQSIKAQKVQLQHRMKQEAEQFRQWKASRERELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLEARKSSNRDASVVANGHVTNGQSNEKSLQRWLDHELEVVVNVHEVRFEYEKQSQVRSALAEELAMLRHVDEFAAKGLSPPRGKNGISRVSSMSPNARMSRIASLENMLNISSNSLVAMASQISEAEERERAFSNRGRWNQLRSMGEAKSLLQYMFNSLADSRCQVWEKEVEIREMKEHIKELVGLLRQSETRRKEVEKELKCREQAIGAELATPASGNFQNSLKHFAEDMSGPLSPNSVPAPKQLRYSAGIINGSTRDSAAFIDQNRKMIPIGQLPTKKLAIIGHGSGKLWRWKRSHHQWLLQFKWKWQKPWRISELIRQSDETIMRAKPRPHALPRTV* 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01616 1033 Coils Coil 676 696 - -
Pte17g01616 1033 Coils Coil 495 515 - -
Pte17g01616 1033 Gene3D Kinesin motor domain 2 392 IPR036961 -
Pte17g01616 1033 Coils Coil 595 636 - -
Pte17g01616 1033 Coils Coil 528 555 - -
Pte17g01616 1033 Pfam Kinesin motor domain 16 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte17g01616 1033 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1021 IPR027640 GO:0003777|GO:0007018
Pte17g01616 1033 ProSiteProfiles Kinesin motor domain profile. 8 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte17g01616 1033 CDD KISc_KIF4 7 366 - -
Pte17g01616 1033 SMART kinesin_4 6 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte17g01616 1033 Coils Coil 866 900 - -
Pte17g01616 1033 FunFam kinesin-like protein KIN-4A isoform X1 2 393 - -
Pte17g01616 1033 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pte17g01616 1033 MobiDBLite consensus disorder prediction 702 720 - -
Pte17g01616 1033 Coils Coil 405 425 - -
Pte17g01616 1033 MobiDBLite consensus disorder prediction 699 720 - -
Pte17g01616 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 396 IPR027417 -
Pte17g01616 1033 Coils Coil 571 591 - -
Pte17g01616 1033 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte17g01616 1033 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte17g01616 1033 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte17g01616 1033 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01616 Pte-Chr17 30169085 30178501 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01616 9 411 Calmodulin-binding Proteins AT5G65930 32.187 4.56e-52 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01616 - - qsa:O6P43_016038 1694.86