Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01615 ATGAATCCTCTCCCCCTCTGTAACTCATTTAACACAATCACTCTCCATCTCCGCTCAAACGCACCCACTTCTCAATCTTCTCCATTTCTCCTTCCCCATTTTCACTACCCCCCCAACTTGAATAGCATCTCTTGGTTTCCCTCCCTTAATATCTCACACAATAATAACACACTCTTTCTTCCCATCTCAAAATCAAAGATTTCACCCCCATATTCTCAAACCGTTGTATCACCTTTAGGGAGATGGCATACCACGCGCTGCGATATCTCTTCCGACCACACCCCATCGTCTGTAAGATACGAAATCGACATGGTCCAAAACAAACAAGGTGTTTATACCCCCAAACCCAAAAAGGTTGTAGTTTTGTGGGACCTGGACAACAAGCCCCCTCGTGGCCCGCCTTACCAGGCTGCGATGGCACTTAAACAGGTAGCTCAACGATTCGGCGACGTCGTTGACATGTCTGCCTATGCCAATCGCCATGCCTTCGTACACTTACCCAACTGGGTACTAGAGCAACGACGTGAACGCAAGCAATTGGACATCCTCGAGCGAAAGCGTGTAGTGGTTCCTGCTGATCCGTACGTTTGTGGTGTTTGTGGACGCAAATGTAAAACAAACTTTGATCTTAAGAAGCATTTCAAACAGCTTCATGAGAGAGAGCGACAGAAGAAGCTCAGTCGAATGAGGTCGCTTAAAGGGAAAAAGCGTCAAAAGTATAAGGAGAGGTTTATTTCTGGGAATCACAAGTACAACGAAACAGCAAAGACTTTGATTAATCCTAAGGTTGGGTACGGGCTTGCCTCGGAATTGAGGCGCGCGGGGGTGTTTGTGAAGACCGTGGAGGACAAACCACAAGCGGCTGATTGGGCATTGAAGAGGCAAATGCAGCATTCCATGAGCCGAGGGATTGATTGGTTGTTTTTGGTTTCTGACGATTCAGACTTCTCGGAGATGCTGAGGAGGGCAAGGGAAGCTGATCTGAGGACTGTGGTTGTGGGGGATGTGGACAGAGCCTTAGGTGGGCATGCGGATTTGTGGATACCATGGAATGGAGTTGAAAATGGGGAGCTTTCGGAGAAAGATTTGATGCCTAAGTGCAGGAGGAGGAATCACTCTTTTGTTTCTGAAGATGGGTTGTTTTCAGTCAGCGAACATGATGGGGATGTTGATGGTGTCAGTGATTTGGATACTTTGATGGATGAGCTAGTTGCGAGGAGGACACAGTTTAATGATTTAGCAAGTTCAGGGTCTTCAGATGAGGAAGGGGAAGGAGGATTTAGGGTTGCGGTGGAAACTGATGGGGACTTTTTGTTAGAGTGGAGTGAGGATGAGGACGCAGAAGACGACTGGTTTTATTGA 1362 0.4736 MNPLPLCNSFNTITLHLRSNAPTSQSSPFLLPHFHYPPNLNSISWFPSLNISHNNNTLFLPISKSKISPPYSQTVVSPLGRWHTTRCDISSDHTPSSVRYEIDMVQNKQGVYTPKPKKVVVLWDLDNKPPRGPPYQAAMALKQVAQRFGDVVDMSAYANRHAFVHLPNWVLEQRRERKQLDILERKRVVVPADPYVCGVCGRKCKTNFDLKKHFKQLHERERQKKLSRMRSLKGKKRQKYKERFISGNHKYNETAKTLINPKVGYGLASELRRAGVFVKTVEDKPQAADWALKRQMQHSMSRGIDWLFLVSDDSDFSEMLRRAREADLRTVVVGDVDRALGGHADLWIPWNGVENGELSEKDLMPKCRRRNHSFVSEDGLFSVSEHDGDVDGVSDLDTLMDELVARRTQFNDLASSGSSDEEGEGGFRVAVETDGDFLLEWSEDEDAEDDWFY* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01615 453 ProSiteProfiles Zinc finger C2H2 type domain profile. 195 223 IPR013087 -
Pte17g01615 453 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 99 403 - -
Pte17g01615 453 CDD PIN_LabA-like 205 335 - -
Pte17g01615 453 ProSitePatterns Zinc finger C2H2 type domain signature. 197 218 IPR013087 -
Pte17g01615 453 Gene3D - 112 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01615 Pte-Chr17 30159603 30162077 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01615 41 439 C2H2 Transcription Factor Family AT5G52010 59.259 1.00e-162 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte17g01615 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01615 - - qsa:O6P43_016041 582.408