Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01614 ATGGAGGAAAGAGAGCAAAACCGGGGTTCGACCCAGCGGAGGGAAACCACGAGAACGAACGGCACAGACAGAGACAAAGAGAAGCGAAAGCATCCGCATCTTCATAACCAAACAACAGAGAAACCATACAGAGGAATCAGGATGAGGAAGTGGGGTAAGTGGGTCGCTGAGATAAGAGAACCAAAGAAAAGATCTAGGATATGGCTTGGTTCTTACACCACCCCAGTCGCAGCAGCGCGTGCCTATGACATCGCCGTTTACTACCTGCGAGGCCCTTCTGCTAAGCTCAACTTCCCGGACTCAATCGTGCAGGAAGATAACGATATATTGCAAAGTGAAGAAAGGGATGTGTCTGCCGACTCCATACGCAGAAAGGCCATCGAAGTCGGTGCTAGAGTGGACGCTCTCCAAACAGCACTTGGGTCTTATTCTTCTACCCACACTCAGAGCAGTACTGATTCTACTAAATCAAGCTGCTCCCGGAAACCCGACTTGAATGAGTATCCGAACTAG 513 0.499 MEEREQNRGSTQRRETTRTNGTDRDKEKRKHPHLHNQTTEKPYRGIRMRKWGKWVAEIREPKKRSRIWLGSYTTPVAAARAYDIAVYYLRGPSAKLNFPDSIVQEDNDILQSEERDVSADSIRRKAIEVGARVDALQTALGSYSSTHTQSSTDSTKSSCSRKPDLNEYPN* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01614 170 MobiDBLite consensus disorder prediction 1 42 - -
Pte17g01614 170 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Pte17g01614 170 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Pte17g01614 170 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Pte17g01614 170 PRINTS Ethylene responsive element binding protein signature 81 101 IPR001471 GO:0003700|GO:0006355
Pte17g01614 170 MobiDBLite consensus disorder prediction 142 164 - -
Pte17g01614 170 CDD AP2 43 101 IPR001471 GO:0003700|GO:0006355
Pte17g01614 170 MobiDBLite consensus disorder prediction 142 170 - -
Pte17g01614 170 FunFam Ethylene-responsive transcription factor 2 41 100 - -
Pte17g01614 170 SUPERFAMILY DNA-binding domain 42 101 IPR016177 GO:0003677
Pte17g01614 170 Pfam AP2 domain 43 91 IPR001471 GO:0003700|GO:0006355
Pte17g01614 170 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Pte17g01614 170 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 21 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01614 Pte-Chr17 30147558 30149772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01614 38 153 AP2-EREBP Transcription Factor Family AT1G46768 62.069 1.38e-48 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte17g01614 AP2 1.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01614 K09286 - qsa:O6P43_016042 185.267