Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01613 ATGGGCAGCATGAAGGTGCGTCAGCTTGCACTTGGATTCTGGGAGCACGAACCAACCTCCCTCACGCTTGGCTGCAAGCGGTTACGCCCTCTTGCTCCAAAGCTACCCAACCCCGACACTACTAACATCGCAGCGGCTACTGCAGTTGCTGCTGCTTTCGATCTCAAGAGCTTCATCAGACCTGAGAGTGCCCCCATCAAACTTGCCGCCTCCGACGATAATAAGAAAGATAGTTCACCTCAGGTGGAGACTCATCCAGGAGGAACGAGGTGGAATCCAACACAAGAACAAATAGGCATACTGGAAATGTTGTATAAGAATGGGATGCGTACTCCAAATGCTCAACAAATAGAGCAGATCACTACGCAACTAAGAAAATATGGCAAGATCGAAGGGAAGAATGTGTTTTATTGGTTCCAAAATCACAAAGCACGTGAAAGGCAGAAGCAGAAACGCTGCAACCTTGGACTTGCACCGGATCCCCGTAGCCCTACGGCCACTAGCAGCAGCAACACAATAAGTTTCGACACATTGGGAGAATTGGTAGAAAGGGAAGAAGATAGCCCCTATAAGAAGTCCAGGAAATGGGCATCTGAGTGCTTGGACGACGAAAACAAGACACTCAAAGTGGTAGATCATAGAACTCTAGATCTCTTTCCATTACACCCGGAGGGCAGATGA 681 0.486 MGSMKVRQLALGFWEHEPTSLTLGCKRLRPLAPKLPNPDTTNIAAATAVAAAFDLKSFIRPESAPIKLAASDDNKKDSSPQVETHPGGTRWNPTQEQIGILEMLYKNGMRTPNAQQIEQITTQLRKYGKIEGKNVFYWFQNHKARERQKQKRCNLGLAPDPRSPTATSSSNTISFDTLGELVEREEDSPYKKSRKWASECLDDENKTLKVVDHRTLDLFPLHPEGR* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01613 226 FunFam WUSCHEL-related homeobox 4 88 155 - -
Pte17g01613 226 MobiDBLite consensus disorder prediction 69 95 - -
Pte17g01613 226 CDD homeodomain 89 150 IPR001356 GO:0003677
Pte17g01613 226 Gene3D - 88 154 - -
Pte17g01613 226 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 226 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Pte17g01613 226 MobiDBLite consensus disorder prediction 81 95 - -
Pte17g01613 226 Pfam Homeodomain 89 148 IPR001356 GO:0003677
Pte17g01613 226 SMART HOX_1 86 153 IPR001356 GO:0003677
Pte17g01613 226 SUPERFAMILY Homeodomain-like 83 152 IPR009057 -
Pte17g01613 226 ProSiteProfiles 'Homeobox' domain profile. 84 149 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01613 Pte-Chr17 30141435 30143366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01613 4 155 Wox Gene Family AT1G46480 66.038 7.50e-65 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte17g01613 Homeodomain 3.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01613 - - zju:107419981 307.375