Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01611 ATGGCAGGACCTACTAATCACATTTCGCCAGCATCACTCTCACCCGGTTGCCGATTCTACCCTTCAGAGGAGCAATTGCTTTGCTACTACCTCACGAACAAGAACAGGAACGACGATACTTTTGCCAGAGGAGGAGGAGGAGATGCTGGTTTTTGCTGTTATGATTTGATCAGAGAGCTTGACTTGTTCGATTACGATCCTTTTGAATTGCCTGACGTTTCCTGCTTTTCTTATGGTTATGGTGGTAGAAAGAGGCACTGGTATTGTTATACCACACTCGATGCTACTGGTGGTACTGAAAACAATACTAGGAAGATTTTGAGAAGAAATGTCAAGAGTGGGTACTGGAGGAGGAAAGGAAGGATTAGGAACGTGTTTGGCAACGGCGGCAAGCCATTGTTAGGGAGAAGGACCACTTTTGTTTTTTATGTATGGAATTCGAACAAGAAGGCCAGTAGGACCGATTGGGTTTTGTATGAGTATGCTTTGCTTGGTCATCTCAAGGATTCTTTTGTCATATGCCGTGTTTTTGTAAAATCTCGTCAGAGAAACAAAATATCAGAGAACGGATTGAGTTCTTGTGCTGAAGAAAGTATTTCGGCTGTGCGCCACATAGGTATTCAGCATGATGGTATCGTCACACCCAATATTGATGATGTAAAAGTAAATGATGAAAATTCTGTTGATAGGAAGGATGCAAACTCGGGATATGTAACAAGTTTTGTCAATGACCCAAATGAAAATCTTGTTAAGACCGCATTGTCACCTGCTTCTCAACTTGCTGTAACCATCCAGAGCTATCAGCAGGGTAGTTGGTCTCGACATCCTGAGGGAGATGGAATGGTTTCTAAGTTACAGGGAGATGAATATCAACGTTCCATTTTAGAGGAGGATTTTATTGAGTTAGATGACCTCATTAATTACGGATGA 930 0.4215 MAGPTNHISPASLSPGCRFYPSEEQLLCYYLTNKNRNDDTFARGGGGDAGFCCYDLIRELDLFDYDPFELPDVSCFSYGYGGRKRHWYCYTTLDATGGTENNTRKILRRNVKSGYWRRKGRIRNVFGNGGKPLLGRRTTFVFYVWNSNKKASRTDWVLYEYALLGHLKDSFVICRVFVKSRQRNKISENGLSSCAEESISAVRHIGIQHDGIVTPNIDDVKVNDENSVDRKDANSGYVTSFVNDPNENLVKTALSPASQLAVTIQSYQQGSWSRHPEGDGMVSKLQGDEYQRSILEEDFIELDDLINYG* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01611 309 ProSiteProfiles NAC domain profile. 13 179 IPR003441 GO:0003677|GO:0006355
Pte17g01611 309 Pfam No apical meristem (NAM) protein 15 163 IPR003441 GO:0003677|GO:0006355
Pte17g01611 309 SUPERFAMILY NAC domain 11 179 IPR036093 GO:0003677|GO:0006355
Pte17g01611 309 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 14 189 - -
Pte17g01611 309 Gene3D NAC domain 22 184 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01611 Pte-Chr17 30130385 30133045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01611 2 212 NAC Transcription Factor Family AT3G44290 25.592 1.40e-20 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte17g01611 NAM 1.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01611 - - qsa:O6P43_016046 304.679