Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01608 ATGACAGACTATGCGTTTCTCAACGATGAGCTTTCAAAGCGCACCTCCATTTTTGGTTTACGATTGTGGGTAGTTCTTGGCATTTGTGTAGGTGCCGCCATAGTCCTTGTACTCTTCCTTATTTCTCTATGGTTTACATCACGCCGTAATAATTCCTCGAAGCTTAACAAGTCATTGCAAAACCCCACTATCCCCAACGTTTCTAAAGAGATCCAGGAAATCCGCATTGACCACTCTCGCAACCCCACTTACCCTCAGTCTGACCCGAAACAACACCAAGTCCCGGACCCGTTACCCGAAGCGGAACCATGGACGTCTAGAACTCAACCTCTGCTTCTTCAGTCGGAGGATGATAGCGCTGTTTCTGGACGTAATAGAATTCACATAGAAATTGGGAAAGACCATCGGATTTCGTATCCGGAGAGGGGTGGCGGGTCCTCCCACTCCCACTCACATGGTAGTGGAGAGACTCGTTCAGGTGATCAAGCCCCGATTGCTGCGCCGGAGGTTTCGCATTTGGGGTGGGGCCATTGGTACACACTCAGAGAGCTTGAGGTTTCTACTAATGGGTTTGCTGATGAGAACGTGATAGGTGAAGGTGGCTACGGAATTGTTTATGGTGGTGTATTGGAAGGTAACACGAAGGTTGCAGTGAAAAACCTGCTCAACAACAGGGGACAGGCTGAGAGGGAGTTCAAAGTGGAAGTTGAGGCAATTGGACGTGTTCGGCATAAGAACCTAGTGAGATTACTTGGATATTGTGCTGAAGGAGCTCACAGAATGCTGGTGTATGAGTACGTCAACAATGGAAATCTAGAACAGTGGCTTCATGGAGATGTAGGGCCTTGTAGTCCGCTTACCTGGGAAATCAGGATGAATATAATACTTGGAACTGCAAAGGGGTTGACATATCTTCACGAGGGTCTGGAGCCCAAGGTTGTCCACCGTGATATCAAGTCTAGCAACATACTACTTGATAAACAGTGGAATCCGAAGGTTTCGGATTTTGGCCTAGCGAAGCTGTTGGGTTCAGAAAGAACATATGTTACAACCCGGGTGATGGGAACATTTGGTTACGTAGCACCAGAGTATGCAAGTACAGGTATGTTGAATGAAAGAAGTGATGTATATAGTTTTGGAATTCTTATAATGGAGATAATTTCTGGGAGAAATCCGGTGGATTATAGCCGACCTCCTGGAGAGGTTCGTACTCGTCTGCAAAAGCAGTTGATGTCTATGTGGATCAATTGGAAATTGTCCCTTTACCTCTTCAAAACTTTATGTTTTCTCTTATATGTGCAGGTGAACCTAGTCGAGTGGCTTAAGACAATGGTTACAAATAGAAATGCAGAGGGGGTGCTGGATCCTCGGTTGCCTGAGAAGCCTTCTTCGAGAGCATTGAAGCGTGCTCTGTTGGTAGCTTTGCGCTGTGTAGATCCAAATGCTCAGAAAAGGCCGAAGATGGGTCACGTCATACACATGCTTGAAGCTGAGGAGTTCCCCTTTCGAGATGACCGTAGAGGCGGTCGTATACATCATGAGGATGGGCGGGGAAGATCATTAGAGAAGCGTGTATGTGAATCTGGTGACAGCAGTGGATATGAAAGTAATGTCCAGGGCAAATAA 1626 0.4668 MTDYAFLNDELSKRTSIFGLRLWVVLGICVGAAIVLVLFLISLWFTSRRNNSSKLNKSLQNPTIPNVSKEIQEIRIDHSRNPTYPQSDPKQHQVPDPLPEAEPWTSRTQPLLLQSEDDSAVSGRNRIHIEIGKDHRISYPERGGGSSHSHSHGSGETRSGDQAPIAAPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYGGVLEGNTKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERTYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIISGRNPVDYSRPPGEVRTRLQKQLMSMWINWKLSLYLFKTLCFLLYVQVNLVEWLKTMVTNRNAEGVLDPRLPEKPSSRALKRALLVALRCVDPNAQKRPKMGHVIHMLEAEEFPFRDDRRGGRIHHEDGRGRSLEKRVCESGDSSGYESNVQGK* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01608 541 MobiDBLite consensus disorder prediction 506 541 - -
Pte17g01608 541 PANTHER OS01G0323000 PROTEIN 4 510 - -
Pte17g01608 541 CDD STKc_IRAK 210 496 - -
Pte17g01608 541 ProSitePatterns Protein kinases ATP-binding region signature. 197 219 IPR017441 GO:0005524
Pte17g01608 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Pte17g01608 541 MobiDBLite consensus disorder prediction 132 162 - -
Pte17g01608 541 FunFam Putative receptor-like serine/threonine-protein kinase 267 418 - -
Pte17g01608 541 MobiDBLite consensus disorder prediction 506 529 - -
Pte17g01608 541 Pfam Protein kinase domain 192 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01608 541 Gene3D Transferase(Phosphotransferase) domain 1 267 506 - -
Pte17g01608 541 SMART serkin_6 191 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01608 541 MobiDBLite consensus disorder prediction 144 158 - -
Pte17g01608 541 Gene3D Phosphorylase Kinase; domain 1 167 266 - -
Pte17g01608 541 FunFam Probable serine/threonine-protein kinase At1g01540 171 266 - -
Pte17g01608 541 SUPERFAMILY Protein kinase-like (PK-like) 173 496 IPR011009 -
Pte17g01608 541 MobiDBLite consensus disorder prediction 79 104 - -
Pte17g01608 541 ProSiteProfiles Protein kinase domain profile. 191 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01608 Pte-Chr17 30115084 30117941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01608 144 498 Trihelix Transcription Factor Family AT1G70460 43.056 1.85e-83 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pte17g01608 Pkinase 6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01608 - - qsa:O6P43_016049 846.654