Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01604 ATGGCATTTCTGCTGGATAACTGTGACGGCATTTTTCTCTCGTTGGACACACACAAGTCAGTACCCGCACCCTTCCTCACCAAAACCTACCAACTGGTGGATGATCCCAACACCGATCACATCGTCTCTTGGGGAGAAGATGACACTACCTTTGTAGTTTGGCGTCCACCTGAGTTCGCTCGCGATCTTCTTCCTAACTACTTCAAGCACAATAACTTCTCCAGCTTTGTCCGGCAGCTCAACACTTACGGTTTCAGGAAGATTGTGCCAGACAGGTGGGAATTTGCTAACGAGTTTTTCAAGAAGGGAGAGAAGCACTTGCTATGTGAGATTCACAGAAGAAAGACCAATCAGCCACAAGTAGCTCTTAACCATCAACCCCATCACCATGCTCCACATGGGGTCAACGCTCCACCATTCTTTCCCTTCTCAAGCAGAGGCAGCATATCTCCACCTGTCGACTCCGACGAGCCTCTCAGCTGGTGTGACTCCTCCCCTATCTCTTCCCCAAGTGGAGGAACTGGGATTTCGACGGTTATAAATGGCGGAGCGAACTTCAACACCTCCGTCACTGCGCTCTCAGAAGATAATGAAAGACTAAGGCAAAGCAACACAATGCTAATGTCTGAGCTTGCACACATGAAGAAGCTTTATAACGACATAATCTATTTCGTGCAGAACCATATGAAGCCCGTTGCGCCAAGCAATGCTTATCCTTCATCCTTACTATTGTGCAATGCGTCGTCCATTCCCACCAACGCTTCCAGTAATGGTTCAACGGTGCAAAGGTGCACGGGTCAGCACTTTGGATATTGTCAACCTACTCCGCCTAAACAGGCCAATGTCATCAAATCTCCGAACAATATTACTTCACAGAGTTCAGTCGCCATTATTGAAGAAGCCAGCAGTAAGGGCTGCAAAACCAAACTTTTTGGAGTTCCTCTTCACTCCAAGAAAAGGTTGCACCCTGAGTATGGTTCTAACCCCACAATTTTGGAGGCCAACAAGGCTCGTTTGGCCCTGGGTAGAGAAGACTTGGGTCTGAATCTCATGCCTCCGTCCGCTTGTTAA 1071 0.4809 MAFLLDNCDGIFLSLDTHKSVPAPFLTKTYQLVDDPNTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTNQPQVALNHQPHHHAPHGVNAPPFFPFSSRGSISPPVDSDEPLSWCDSSPISSPSGGTGISTVINGGANFNTSVTALSEDNERLRQSNTMLMSELAHMKKLYNDIIYFVQNHMKPVAPSNAYPSSLLLCNASSIPTNASSNGSTVQRCTGQHFGYCQPTPPKQANVIKSPNNITSQSSVAIIEEASSKGCKTKLFGVPLHSKKRLHPEYGSNPTILEANKARLALGREDLGLNLMPPSAC* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01604 356 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte17g01604 356 FunFam Heat stress transcription factor B-4 17 115 - -
Pte17g01604 356 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte17g01604 356 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Pte17g01604 356 Gene3D - 17 116 IPR036388 -
Pte17g01604 356 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 259 IPR027725 -
Pte17g01604 356 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte17g01604 356 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte17g01604 356 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte17g01604 356 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01604 Pte-Chr17 30084781 30086100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01604 19 355 HSF AT1G46264 56.410 7.64e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte17g01604 HSF_DNA-bind 1.8e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01604 K09419 - zju:107419979 519.62