Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01597 ATGGAAGGCTACGATGGGACGGTGAGGTTTGGGGCTCTTAGCTTGAAGTCTGATCGGAGCGGATTTGAATTGGATCCCGATGTAACAGTTTCGTCGCCGGTTACTCGACAGAAAGCTACTGCGGCCAAGCAATTCATAGAGAATCACTACAAGAACTATATCCAAGGCCTGCACGATCGCAGGGAGAGGCGCAGAGCAGTTCAATTAAGAGCTCAAGAAGCTCAGGTATCGATTGAAGAACAAGAAGAGATGCTGAGGAATTTGGAACGCCGCGAAACTGCATTTATGAGATTGCAGAGACGCAAAATTGGAATTGACGACTTTGAGCAATTAACCATAATTGGCAAAGGAGCATTTGGCGAGGTCAGATTATGTCGTGCCAAAGCTACTGGAGAAATCTTTGCTATGAAGAAATTGAAGAAATCAGAAATGCTTAGCCGTGGGCAGGTAGAACATGTGCGGTCAGAGAGAAACTTGCTTGCAGAGGTTGATAGTAGATGCATAGTGAAACTCCATTATTCCTTTCAAGATTCTGATTTTTTGTATCTTATCATGGAGTACTTGCCCGGTGGTGACATTATGACATTGTTGATGAGAGAGGATATTCTCTCTGAAGATGTTGCTCGCTTCTACATGGCAGAGAGCATTCTAGCAATCCACTCGATTCATCAACACAACTATGTTCATAGGGATATAAAACCAGACAATCTCATACTGGACAGAAACGGTCATCTGAAGCTTTCTGATTTTGGCCTATGCAAGCCTCTGGATAATAAGTATTCTAGTTTCTTGGAAAATGAAGATCTGTCCTCTCATGAAGCCTGTGGTGGAACTGAAGAAAGTTTCATGTCTCCTTGGTCCATGCCAAAAGAACAATTACAACGCTGGAAACGTAATCGTCGTGCATTGGCATATTCAACTGTTGGTACTCTTGATTATATGGCTCCTGAAGTTTTGCTCAAAAAAGGATATGGCATGGAATGTGATTGGTGGTCGCTTGGAGCAATCATGTACGAGATGCTTATCGGTTATCCTCCTTTCTGTTCTGATGATCCGAGAATCACATGCCGCAAGATAATTAACTGGAAAACATGCCTTAAATTCCCTGAGGAACCTAAGATATCAAATGAGGCCAAGGATCTGATATGCCGTTTATTATGTGACGTTGAAACTAGGTTAGGGACCCAAGGAGTGGAAGAAATCAAGGCACATCCATGGTTCAGGTTTGTAAACTGGGACATGCTGTATGAAATGGAAGCTGCATATAAACCTACTGTCTCTGGAGACTTGGATACTCAGAATTTTGAAAAATTTCCTGAAGTAGAAGGTCCACCATGTGAGGTACCGACAGTAGGACCTTGGAGGAAGATGTTGACTTCCAAAGATACAAACTTTATAGGTTATACTTACAAGAAGTCTGATGTTCTCAAAGCACTTGATAGTTCAGGTGCAGATGTCAGATCAAATGGGTCTTCAAATGCTGCATCCCTCGTTTCATTATTAGGTCGGTTTGACTTGCAACAAAACGCCATTTCAGAGAATGAGCAAAATCAAGAAACGTGA 1563 0.4242 MEGYDGTVRFGALSLKSDRSGFELDPDVTVSSPVTRQKATAAKQFIENHYKNYIQGLHDRRERRRAVQLRAQEAQVSIEEQEEMLRNLERRETAFMRLQRRKIGIDDFEQLTIIGKGAFGEVRLCRAKATGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYMAESILAIHSIHQHNYVHRDIKPDNLILDRNGHLKLSDFGLCKPLDNKYSSFLENEDLSSHEACGGTEESFMSPWSMPKEQLQRWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIINWKTCLKFPEEPKISNEAKDLICRLLCDVETRLGTQGVEEIKAHPWFRFVNWDMLYEMEAAYKPTVSGDLDTQNFEKFPEVEGPPCEVPTVGPWRKMLTSKDTNFIGYTYKKSDVLKALDSSGADVRSNGSSNAASLVSLLGRFDLQQNAISENEQNQET* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01597 520 Gene3D Transferase(Phosphotransferase) domain 1 192 425 - -
Pte17g01597 520 SUPERFAMILY Protein kinase-like (PK-like) 85 458 IPR011009 -
Pte17g01597 520 CDD MobB_NDR_LATS-like 42 103 - -
Pte17g01597 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Pte17g01597 520 CDD STKc_NDR_like 106 471 - -
Pte17g01597 520 FunFam Non-specific serine/threonine protein kinase 306 425 - -
Pte17g01597 520 ProSiteProfiles AGC-kinase C-terminal domain profile. 408 480 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte17g01597 520 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Pte17g01597 520 ProSiteProfiles Protein kinase domain profile. 108 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01597 520 SMART pkinase_C_6 408 472 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte17g01597 520 Coils Coil 64 98 - -
Pte17g01597 520 SMART serkin_6 108 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01597 520 PANTHER SERINE/THREONINE-PROTEIN KINASE 32 460 - -
Pte17g01597 520 Pfam Protein kinase C terminal domain 426 470 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pte17g01597 520 FunFam Non-specific serine/threonine protein kinase 79 191 - -
Pte17g01597 520 Gene3D Phosphorylase Kinase; domain 1 105 436 - -
Pte17g01597 520 Pfam Protein kinase domain 108 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01597 520 FunFam Non-specific serine/threonine protein kinase 192 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01597 Pte-Chr17 30034896 30041329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01597 1 513 AGC Kinase Gene Family AT5G09890 76.789 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pte17g01597 Pkinase 4.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01597 K08790 - pop:18104890 884.404