Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01590 ATGGCCACTGTAACAGGAAGAGGTTTCTCCTTTCAGCGTTGCTTCTCATCCCCTGTTTCCAAGAGCGGGAGGTGTCTATACGACAAATCTTCATTTTCTGGAGGCAACTCCTTCCTCCTTCGTAATAGGGAGTTCTGTGGCAGTGGATGTTATGCTCGGACTTTGGTGGTTTCTCAAGTCCAACAGCGCCCTACATGGCTCCCAGGGATTGACCCTCCGCCTTATCTTGATGGAACGCTGGTTGGAGATTATGGATTTGACCCACTTGGGCTGGGAGAGGATCCTGGAAGCCTGAGATGGTACGTGCAGGCGGAACTGGTTCATGCTCGCTTCGCCATGGCTGGAGTTGCTGGAATTCTTGTAACCGATCTTCTCCGTGTTACTGGACTTCGCAACTTACCTGTTTGGTTTGAAGCTGGTGCTGTAAAATATGATTTTGCCAACACGGGAACACTCATCGTTGTTCAACTGCTTTTAATGGGATTCGCTGAAACTAAAAGGTACATGGACTTCGTGAGTCCTGGGTCTCAAGCAAAGGACGGGACCTTCCTTGGATTTGAAGCCTCATTGGAAGGTTTAGAGCCAGGGTACCCTGGAGGTCCCTTGCTAAATCCACTTGGCCTGGCCAAAGATATAAAGAATGCTCATGACTGGAAGCTCAAAGAGATTAAGAACGGACGACTTGCGATGGTAGCCATGTTAGGTTTTTTTGTACAAGCGTATGTGACTCATGTTGGACCGATCGATAACCTTGTGGAGCATCTTTCCAATCCATGGCACAAGACTATTATTCAGACGCTTGCCAACACTGGCTAA 816 0.4841 MATVTGRGFSFQRCFSSPVSKSGRCLYDKSSFSGGNSFLLRNREFCGSGCYARTLVVSQVQQRPTWLPGIDPPPYLDGTLVGDYGFDPLGLGEDPGSLRWYVQAELVHARFAMAGVAGILVTDLLRVTGLRNLPVWFEAGAVKYDFANTGTLIVVQLLLMGFAETKRYMDFVSPGSQAKDGTFLGFEASLEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGFFVQAYVTHVGPIDNLVEHLSNPWHKTIIQTLANTG* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01590 271 Gene3D Chlorophyll a/b binding protein domain 65 271 - -
Pte17g01590 271 Pfam Chlorophyll A-B binding protein 72 241 IPR022796 -
Pte17g01590 271 SUPERFAMILY Chlorophyll a-b binding protein 57 269 - -
Pte17g01590 271 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 60 269 IPR001344 GO:0009765|GO:0016020
Pte17g01590 271 FunFam Chlorophyll a-b binding protein, chloroplastic 64 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01590 Pte-Chr17 29997340 30002300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01590 52 263 Chloroplast and Mitochondria Gene Families AT3G61470 47.418 4.40e-61 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01590 K08911 - qsa:O6P43_018922 385.185