Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01583 ATGTCCAGCAGGGGAGAACAACAAACTGTCCCTCTCTCGGTTCTTCTCAAGCGTGAACTGGCAAATGAGAAGATTGAGAGGCCGGAGATTGTGTATGGTCAAGCTAGCGAGAGCAAGAAAGGCGAAGATTTTACTCTAATAAAGACTGAATGCCAAAGGGTTGTTGGAGATGGAGTTTCGACCTATTCCGTTTTCGCGTTATTTGATGGACACAATGGATCTGCGGCAGCCATTTATGCTAAGGAGAATCTTCTAAATAATGTTTTAAGTGCTATTCCACCGGACCTAAATAGAGATGAATGGATAGGAGCATTGCCCAGAGCTCTAGTTGCTGGTTTTGTGAAAACGGATAAGGATTTCCAACAGAAAGCACAAACATCAGGTACAACTGTCACATTCATGATTATAGAAGGATCATTTGTCACTGTTGCATCAGTTGGTGATTCTCGTTGCATACTTGAAGCTGAGGGTGAAATATATTATCTATCAGCAGATCATAGACTTGAAAGTAATGAGGAAGAGAGATTGCGAATAACATCAAGCGGGGGTGAAGTTGGTCGACTAAATACTGGAGGCGGTGCAGAGATTGGCCCTTTAAGATGCTGGCCTGGTGGATTATGCCTTTCAAGATCCATCGGGGATGTGGATGTCGGTGAATTTATTGTTTCTGTACCTTATGTGAAGCAAGTGAAGCTTTCAACAGGAGGTGGCAGGCTAATCATATCTAGTGATGGTGTTTGGGATGCTGTAACAGCGGAAATGGCCCTTGACTGTTGTCGTAACTTATCCCCCGACGCTGCAGCAGCACAAATTGTTAAAGACTCTGTACAGGCAAAAGGTCTTAGAGATGATACAACCTGCATCGTCATTGATATACTAACACAGGAGAAGAAAGTTGTACCTTTGCCAGCCCGGAAAAAATCTGGGAAGAAAGTATTCAAATCAATGTTTCGCAAGAGGTCTTCAGAATCATCTTCTAATACTGAAAAAGAATATGTTGAACCAGATGTAGTAGAGGAAATTTTTGAAGAAGGATCAGCTATGCTGTCCGAAAGGTTAGACACGAAATACCCACTCTGTAACATGTTCAAGTTGTTCGTGTGTGCGGTCTGTCAGTTAGAGATGAAACCTGGCGAGGGTATTTCTATACATGCTACTGAATCAAATCGCGGTAAATTGCGCCCTTGGGATGGGCCTTTCCTTTGCTTAAGTTGTCAAGAGAAGCGAGAAGCCATGGAAGGGAAAAGAGCGCCAGATAGACATAGCAGTGCAAGTGACGATTAA 1284 0.4322 MSSRGEQQTVPLSVLLKRELANEKIERPEIVYGQASESKKGEDFTLIKTECQRVVGDGVSTYSVFALFDGHNGSAAAIYAKENLLNNVLSAIPPDLNRDEWIGALPRALVAGFVKTDKDFQQKAQTSGTTVTFMIIEGSFVTVASVGDSRCILEAEGEIYYLSADHRLESNEEERLRITSSGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDVDVGEFIVSVPYVKQVKLSTGGGRLIISSDGVWDAVTAEMALDCCRNLSPDAAAAQIVKDSVQAKGLRDDTTCIVIDILTQEKKVVPLPARKKSGKKVFKSMFRKRSSESSSNTEKEYVEPDVVEEIFEEGSAMLSERLDTKYPLCNMFKLFVCAVCQLEMKPGEGISIHATESNRGKLRPWDGPFLCLSCQEKREAMEGKRAPDRHSSASDD* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01583 427 ProSiteProfiles PPM-type phosphatase domain profile. 33 292 IPR001932 -
Pte17g01583 427 PANTHER PROTEIN PHOSPHATASE 32 291 IPR015655 GO:0004722|GO:0006470
Pte17g01583 427 Gene3D - 31 300 IPR036457 -
Pte17g01583 427 FunFam probable protein phosphatase 2C 12 32 298 - -
Pte17g01583 427 CDD PP2Cc 39 292 IPR001932 -
Pte17g01583 427 Pfam Protein phosphatase 2C 57 283 IPR001932 -
Pte17g01583 427 SMART PP2C_4 23 290 IPR001932 -
Pte17g01583 427 SMART PP2C_SIG_2 54 292 IPR001932 -
Pte17g01583 427 SUPERFAMILY PP2C-like 38 292 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01583 Pte-Chr17 29972162 29976488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01583 1 426 PP2C-type Phosphatase Gene Family AT1G47380 77.103 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01583 - - cave:132183890 704.901