Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01574 ATGCGTGGCTTGAGCGCTGCTAGTCTTCTCTGCCAAGAAAGTGATGAGTCTAATCTGGAAGAAGACGGCCACGATGAAGATTACTTGTTCCCCGCAGATGCTGATTATGTGGGAATGTTAATTGAACGAGAAACCAGTCTCGGATATGGAAAGAATGCATCTTTTGAATGTGGGAATTGGATCAAAGGTGCCCGCTTGGAAGCTATTACATGGATTATGCAAACCAGAGAAAGATTTGGTTTTCGGTTCGCAACAGCTTATTTGTCCATAACATACATCGATGCATTCCTTTGCAGAAGAGCCATTGACGATGAAAAACTTTGGGCAATCCGGTTACTGTCAGTGGCATGTCTCTCTCTGGCAGCGAAAATGGAGGAATGCAATACACCCTTGCTACCACAGTTCCACCAAGAGCATTACCGGTTCAGCAGTGAAGATATTCAAAGAATGGAACTGCTAGTACTGCAGACATTGGAATGGAAAATGAGATTTGTTACTCCTTTTGCTTTCCTTCAATTTTTCATCAGAGAGTTCTGTGGAGAACCCCCACCTCATGACATTATCACCAGGATTAACGTACTCGTGTTCGAAATGGTGAAAGAGGTTAACTTAATGAAGCAACCACCATCTGTTATAGCAGCGGCAGCTACATTGATAGCTTCCGATCAGCGATTGACAATAAGATCAATGGAATTGAAGATAAAGTCCATTACCAGATATAGTTCTCTTAAAGTTGAAGATATCTTTACTAGCTACAATGTGATGCTAAAACTAAACAAGGAGAAGACCAAGTTATTTGATTCCCCAAATCCAACACTCCTTGATGCATTAGAAGGTTCTTCAACTGCGTCAGATATAAGCACTGAGAGAGAGAGGATTGCATTCGATGATCACGAGCAAATACGTGAAAGGAAGCGTCCCTGCAACAGAAAATTTTAA 939 0.4175 MRGLSAASLLCQESDESNLEEDGHDEDYLFPADADYVGMLIERETSLGYGKNASFECGNWIKGARLEAITWIMQTRERFGFRFATAYLSITYIDAFLCRRAIDDEKLWAIRLLSVACLSLAAKMEECNTPLLPQFHQEHYRFSSEDIQRMELLVLQTLEWKMRFVTPFAFLQFFIREFCGEPPPHDIITRINVLVFEMVKEVNLMKQPPSVIAAAATLIASDQRLTIRSMELKIKSITRYSSLKVEDIFTSYNVMLKLNKEKTKLFDSPNPTLLDALEGSSTASDISTERERIAFDDHEQIRERKRPCNRKF* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01574 312 PANTHER CYCLINS 37 239 IPR039361 -
Pte17g01574 312 Pfam Cyclin, N-terminal domain 64 162 IPR006671 -
Pte17g01574 312 Gene3D - 164 246 - -
Pte17g01574 312 CDD CYCLIN_AtCycD-like_rpt2 165 255 - -
Pte17g01574 312 CDD CYCLIN_AtCycD-like_rpt1 64 160 - -
Pte17g01574 312 Gene3D - 64 163 - -
Pte17g01574 312 SUPERFAMILY Cyclin-like 145 259 IPR036915 -
Pte17g01574 312 SMART cyclin_7 70 156 IPR013763 -
Pte17g01574 312 SMART cyclin_7 169 257 IPR013763 -
Pte17g01574 312 Pfam Cyclin, C-terminal domain 165 259 IPR004367 -
Pte17g01574 312 FunFam Cyclin-D5-1 60 163 - -
Pte17g01574 312 SUPERFAMILY Cyclin-like 26 162 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01574 Pte-Chr17 29890132 29891506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01574 5 242 Core Cell Cycle Gene Families AT4G37630 37.405 4.86e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01574 K18811 - qsa:O6P43_015990 294.664