Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01563 ATGGCACCTCTTGAAGAAGATTCGACCACTCTCCTCAAGCTTGAGTCAGCATGCTCAGAGTTGAAAGCTCTCCTACACACCTCTGCAAAAATGCAACAAAACACACATGTGGTGGACAAAAGATTTGACCTTTGTATGAAAACTACTGTATCGTCTAAAAGAGTTTCCCCTTTGCAAAAAGACCTCGACACCAGAATGAACAGAGCTGTTTCTCCTGCATTGGCACTTCGTGATAACTTCAAGCTATTTGAGTCTCTGCAACTTCAACTTGTTGACCTCTCAGCGAAGCTATCTGCAGAGAAGATATGGGAGAAGCGGCTGAAGATGCTACTCAAATATGTTGACTGCCTTAAACAGCTTAATGAGACTATCAGCTTCATAAGTGAAGAGGGTGAGCCAGTGATTCAGAAACTTCAAGAACTGGTGGAGTACATAAGCCGGACAAAGGAAGTGGATCAATGCGAGACAAGCAGGTTAAGGGAGGCGTTGATGGTTCTCAAGACATTGTATGAAAATGAGACTGACGCTATGAGGTTTGAAGGTCTGCTGGACGATGCTTTGATCAATATGCAGGATCAATATGAGATCCTATTGCAAAGGATTAAGCATCAGAATATCGCAGATAAGTCACAGATCAATGATAAGATAGAACAGGATGGCATGTGCTACGGTTATGACTTGGGCTCTGCATTAGAAATTGAGGTTTTGCAGAGAATATCAGAGACGCTTGCTGCCAATGATTGCTTGGACATATGCATAGGCATTTACATCAAGGTTAGGTATAAAAGGACAGCGAAAACACTCATGAGGCTGAACCCAGATTATTTGAGAGCATATACCCCTGAAGCAATCGACAACATGGATTGGGAAAAGTTAGAAACAGCAATAACCCTTTGGATGCAACACTTTGCCCTTGCCGTCAAGGACGTTCTTGTATCAGAGAAAAAACTTTGCAAACAAGTGTTTGGTAACACCATGGACGGTGTAATATGGGAAGAATGTTTTGCAAGGATATCTGATAAGATCACAACAGTATTCTTTCGATTTGGAGAAGGAGTTGCCAGAAGCAGCAAAGAACCCCAGAAGCTGTTCAAGCTTTTGGACATGTTTGACTCCTTGGAGAAACTTCAACCTGCTTTCGCTGAAGTTTTTCAAGAGGAGGCTCTAGCAGATATCACTTGGCGATTTGGGGAGCTTCAAAAGCTTGTCATCCGCGCTTCCAGCAAAGTGTTCTGGGAATTTGGTTTGCAAATAGAAGTCGGTACAGATGGAAGTCCACCAAAACAAGACGGCTCTGTTCCCAAGCTTGTTAGGTATGCCATCAACTACCTCAAGTACCTAGCCACAGATCAGTACAGAACGGCCATGGTTAAAGTACTTAAAACAGAGCAAGCACGAAAGGTTGGGATGTTATCCATACCTGACAACGATAATGATATATTCAGTAACGCCATTACAAACTTAATGGAAGCCCTTCGGAGGAATGTAGATTTCAGAAGGTCTCATTTTAACGACAAAGTTCTGAATCACATATTCACCATGAATACGTACTGGTATATCTATATGAGGACTAGGAACACCGAGCTGAGTAAGGTTGTAGGAGAGACATATATGAAAAAGAAGTATAAGAAGGTGGCTCAGGAATCATCATACTTGTATCAGAAGCAAGCATGGGAGCCTATTGTTGAAATTTTGAGACTTCATGAGCTACAGAAATACAGTGAAGGAGCCGTTGGAACCATAGTTAGAATGAAAGTTGAAAATTTCTTTAGGGGTTTTGAGGAAATAGCAGAGAGACATTGTGGGGTTTATACTATAGCAGATGTTGACTTGAGGGAACAGGTCAAAGAAGCAATCTTGCAATCTGTAGTGCCGCTTTATACTGAGTTTTTGGAGATGTACTCTGATTTCTTGGTTGGGAAATCATACATTAGTCCCGACACGTTACAAGGGTTGGTGTGTCAAATTTTTGATGGATGTGATTCCAATTTGAAGAGAAGGATCTCAAAAGATCGATCGAGTAGCAGACGGAACTCGTTTTCAGTTGAAAACAAGTAA 2058 0.4174 MAPLEEDSTTLLKLESACSELKALLHTSAKMQQNTHVVDKRFDLCMKTTVSSKRVSPLQKDLDTRMNRAVSPALALRDNFKLFESLQLQLVDLSAKLSAEKIWEKRLKMLLKYVDCLKQLNETISFISEEGEPVIQKLQELVEYISRTKEVDQCETSRLREALMVLKTLYENETDAMRFEGLLDDALINMQDQYEILLQRIKHQNIADKSQINDKIEQDGMCYGYDLGSALEIEVLQRISETLAANDCLDICIGIYIKVRYKRTAKTLMRLNPDYLRAYTPEAIDNMDWEKLETAITLWMQHFALAVKDVLVSEKKLCKQVFGNTMDGVIWEECFARISDKITTVFFRFGEGVARSSKEPQKLFKLLDMFDSLEKLQPAFAEVFQEEALADITWRFGELQKLVIRASSKVFWEFGLQIEVGTDGSPPKQDGSVPKLVRYAINYLKYLATDQYRTAMVKVLKTEQARKVGMLSIPDNDNDIFSNAITNLMEALRRNVDFRRSHFNDKVLNHIFTMNTYWYIYMRTRNTELSKVVGETYMKKKYKKVAQESSYLYQKQAWEPIVEILRLHELQKYSEGAVGTIVRMKVENFFRGFEEIAERHCGVYTIADVDLREQVKEAILQSVVPLYTEFLEMYSDFLVGKSYISPDTLQGLVCQIFDGCDSNLKRRISKDRSSSRRNSFSVENK* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01563 685 Pfam Exo70 exocyst complex subunit 299 649 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pte17g01563 685 PANTHER EXOCYST COMPLEX PROTEIN EXO70 112 658 IPR004140 GO:0000145|GO:0006887
Pte17g01563 685 Gene3D Exocyst complex component Exo70 151 667 - -
Pte17g01563 685 SUPERFAMILY Cullin repeat-like 173 658 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01563 Pte-Chr17 29839997 29842770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01563 60 638 EXO70 exocyst subunit family AT4G31540 27.627 2.82e-66 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01563 - - qsa:O6P43_015979 823.928