Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01559 ATGGGAATCAAGTATTTTCCAGCTGAGAGTCATCGCCCTTGGAGCTTGAACAACGTTGTAGTTGTTGCTGTCCTTGCCATGCTCATTCTGTTGCAGGTATGCAGTCAACAGCTTGCAGTAGCACAACAATCGGTCCAATTCCTTCCTGGATTTCAGGGCCCCCTTCCTTTTGAGCTCGAAACTGGGTATATAGGAGTGGGTGACTCAGATGAAGTGCAGCTATATTACTACTTCATTAAATCAGAAGGCAATCCCAAAGAGGACCCTCTTATATTTTGGCTAACTGGTGGTCCGGGTTGTACTGGATTGTCCGGGTTGATGTTGGAAATGGGCCCAATTGCCTTCAAGACCGAAGAATACACTGGCGGGGTGCCAAATCTTCTCTTGAGGTCGCACTCATGGACAAAGGTTAGCAGCATGATATTTATAGACTCCCCGGTTGGCACTGGCTTCTCCTATGCTAAGAATCAGACACTCTCGCAATTACTTAGCGACAAGAAGCAAGTGCATCATGCCTACCAGTTTCTTCAAAAGTGGTTGACAGATATTTATCCAGAATTTCTCTCAAACCCTCTGTATATTGGCGGTGAATCATATGCAGGCATAACTGTTCCAGTCCTTGCTCAAGAAATATCAAATGGAAATGAAAGAGGCGTCCATCCTAAGATGAATCTACAGGGATACATACTAGGGAATCCTAGTACAGATAACAAAGAAGATAACTATAAAGTCCCGTTTGCGCATGGAATGGCTCTTATCTCTGATGAATTATACAAGTCATTGAAGGAAAACTGTAAAGGGGTGTATATGATCACTAATGAGAGTAGCGGATTTTGTACAAGAGATATGCAGACTTTTGACAAGTTGATTTCGGGAATTGCCACTAATAGCATTTTAGAGGCTAAATGTGAGTACACTTCTCCAAGGCCAAGAGAAGTCCCTTCGACAAGATATATGAGCGAAAAACTTGAGATGGTTCCCATCCATCCTCGTCTTTCGTTGCCGCCTCTAGGCTGTCGGACATATCCATACTTTATGTCAGTTTACTGGGCAAACAATGAGGACGTCCGGAAAGCACTTCATGTCCGCAAGGGAACTGTGGGGATTGGAGAATGGAAACGATGTAACAATGATATCTCAAAAAAGTATGACTTTGACGTACCAAACAGCTTGCCATATCACGCAAATCTTAGTAGGAAAGGCTATCGTTCTCTGGTATATAGTGGTGATCATGACATGATTGTCTCTTACTTGGCAACTCAAGCATGGATAAGATCTTTGAACTACTCCATCATTGATGAGTGGAGACCCTGGTTTTTGGAGGATCAAGTTGCGGGGTATACGAGAACTTACTCCAATCGGATGACCTACGCTACTGTGAAGGGTGCTGGACATACTGCCCCGGAGTATAATCCGAAACAGTGCTTAGCCATGATCGGAAGGTGGTTATTTGGAAATCCTTTATAG 1467 0.4376 MGIKYFPAESHRPWSLNNVVVVAVLAMLILLQVCSQQLAVAQQSVQFLPGFQGPLPFELETGYIGVGDSDEVQLYYYFIKSEGNPKEDPLIFWLTGGPGCTGLSGLMLEMGPIAFKTEEYTGGVPNLLLRSHSWTKVSSMIFIDSPVGTGFSYAKNQTLSQLLSDKKQVHHAYQFLQKWLTDIYPEFLSNPLYIGGESYAGITVPVLAQEISNGNERGVHPKMNLQGYILGNPSTDNKEDNYKVPFAHGMALISDELYKSLKENCKGVYMITNESSGFCTRDMQTFDKLISGIATNSILEAKCEYTSPRPREVPSTRYMSEKLEMVPIHPRLSLPPLGCRTYPYFMSVYWANNEDVRKALHVRKGTVGIGEWKRCNNDISKKYDFDVPNSLPYHANLSRKGYRSLVYSGDHDMIVSYLATQAWIRSLNYSIIDEWRPWFLEDQVAGYTRTYSNRMTYATVKGAGHTAPEYNPKQCLAMIGRWLFGNPL* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01559 488 Pfam Serine carboxypeptidase 49 484 IPR001563 GO:0004185|GO:0006508
Pte17g01559 488 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 44 472 IPR001563 GO:0004185|GO:0006508
Pte17g01559 488 FunFam Carboxypeptidase 390 485 - -
Pte17g01559 488 SUPERFAMILY alpha/beta-Hydrolases 45 487 IPR029058 -
Pte17g01559 488 FunFam Serine carboxypeptidase-like 11 39 488 - -
Pte17g01559 488 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Pte17g01559 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Pte17g01559 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 142 IPR001563 GO:0004185|GO:0006508
Pte17g01559 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 143 153 IPR001563 GO:0004185|GO:0006508
Pte17g01559 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Pte17g01559 488 Gene3D alpha/beta hydrolase 36 487 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01559 Pte-Chr17 29814129 29817958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01559 45 67 Calmodulin-binding Proteins AT2G22960 82.609 6.54e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01559 K16296 - qsa:O6P43_015968 596.66