Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01557 ATGTTGCCTGTTGTTGATGTTACTGGTGACTCCAAGGTGTTGAAGAAGATCCTCAGAGAGGGTGAAGGTGCTGTCGCTGATGATGGTGCATCTGTCTCTGTTAGCTATACAGCTAAGCTCGATGATGGCACTGTATTTGAAAAGAAAGGAATTGATGGAGAGCCACCTTTGGAATTTGTCACCGATGAAGAACAAGTGATTACTGGTTTAGATAGAGCCATTGCAACAATGAGGAATGGTGAGAAAGCCACATTAACTATACATCCAGATTTTGGATATGGAAGTGTTGAAGTACAACGGGACCTTGCAGTAGTGCCTCCAGGGTCCAATGTAATATATGATGTGGAGATGTTACATCTGATAAAGGAAAAAGCACCATGGGAATTGAATATTCATGAAAAAATTGAGGCAGCTGAAAGGAAGAAAGAAGAAGGAAATGTATTATTCAAAGCTTGCAAATATCAGCGAGCTGGAAAGAAATATGAGAAGGCTGCAGATTATGTTTGTGAGGATGAACCATTCAGTGCTGAAGAGCAAAAAGTAATAAAGACACTGAGAGTGTCATGCTGGTTGAATGGTGCGGCATGTAATCTTAAATTAAACAAATTTCAAGAAGCAATTAAGCTATGTTCGAAGGTGCTTGATGTAGAGTTCCAGAATATAAAAGCTTTGTTCAGGCGAGCACAGGCATATCTTCAATCTGGGGACTTTGTCTTGTCTGATGTAGATATAAAAAAGGCTCTAGAGACTGATCCGGATAACAGAGAAGTAAAGTTGCTTCGGAGGAAACTGAAAGAACTTCAAGCTGAGAGCAACAAGAGAGATGCCAGGTTCTATGCCAACATGTTTGCGTGTAAAGCAAAAGATTCATCCATCGCAACAAAGAAACTGAAGTTGGAGAAACCAGACAGTAAGGAAGAAGACGTTACGGCGATGGAAATGGAGAAAAAGTGCTGA 957 0.4065 MLPVVDVTGDSKVLKKILREGEGAVADDGASVSVSYTAKLDDGTVFEKKGIDGEPPLEFVTDEEQVITGLDRAIATMRNGEKATLTIHPDFGYGSVEVQRDLAVVPPGSNVIYDVEMLHLIKEKAPWELNIHEKIEAAERKKEEGNVLFKACKYQRAGKKYEKAADYVCEDEPFSAEEQKVIKTLRVSCWLNGAACNLKLNKFQEAIKLCSKVLDVEFQNIKALFRRAQAYLQSGDFVLSDVDIKKALETDPDNREVKLLRRKLKELQAESNKRDARFYANMFACKAKDSSIATKKLKLEKPDSKEEDVTAMEMEKKC* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01557 318 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 29 121 IPR001179 GO:0003755
Pte17g01557 318 PANTHER PEPTIDYLPROLYL ISOMERASE 4 307 - -
Pte17g01557 318 FunFam Peptidylprolyl isomerase 126 281 - -
Pte17g01557 318 Gene3D Tetratricopeptide repeat domain 125 281 IPR011990 GO:0005515
Pte17g01557 318 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 25 118 IPR001179 GO:0003755
Pte17g01557 318 SUPERFAMILY TPR-like 128 282 IPR011990 GO:0005515
Pte17g01557 318 Coils Coil 257 277 - -
Pte17g01557 318 FunFam Peptidylprolyl isomerase 3 123 - -
Pte17g01557 318 SMART tpr_5 187 220 IPR019734 GO:0005515
Pte17g01557 318 SMART tpr_5 221 254 IPR019734 GO:0005515
Pte17g01557 318 Gene3D - 3 124 IPR046357 GO:0003755
Pte17g01557 318 ProSiteProfiles TPR repeat profile. 221 254 IPR019734 GO:0005515
Pte17g01557 318 SUPERFAMILY FKBP-like 7 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01557 Pte-Chr17 29803014 29808126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01557 4 284 Calmodulin-binding Proteins AT3G25230 54.417 3.03e-98 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01557 K09571 - qsa:O6P43_019033 432.18