Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01527 ATGGATTGTCAAAAGGTCGGAGCTCCAAAAGATATGGTGGCGCGTCTAGCTGTTGCTCGCCAAGAATTTGATGCACGGCAACGGCCTTCCGTAACTTCAAGAGGAAGTGCGAAGGAACCAGAATTAGACCAGTTCATGGTGAGAGTCAAGGACCCAGAACTAGACCAGTTCATGGTGAGAGTCACTGTTACTATTTTTGCCACTGGAACCAAAAATCACTACTGA 225 0.4711 MDCQKVGAPKDMVARLAVARQEFDARQRPSVTSRGSAKEPELDQFMVRVKDPELDQFMVRVTVTIFATGTKNHY* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01527 74 Pfam KNOX1 domain 1 24 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01527 Pte-Chr17 29528804 29529127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01527 1 46 Homeobox Transcription Factor Family AT4G08150 57.447 7.27e-13 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01527 - - gab:108450962 76.6405