Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01518 ATGGAGAAGGAGAAAGACAAACTTGCACCAGAAATGGCTGCCCGAAACCCCCCAGCCTTCAATGAAATTCTATCGTATTCGAGTTCCAAATTACTTTTCCTGAGCAATTCATACAAGTTCGATACTGACCAAAACAATGTAATGGGTGGAGCTGCTGCAATGGCTAATGACTCAATATTCCATAACCAGATTGAATCACGAGAAGTGTTCCCCAGATTGGCAATTCTAGATCAATCAGCTGAAGGGGTAGCTGCTTCTGCCTCTTCATTGGATGCCTTTCTTGCTGCAAAAAGTTGTTTGCAAGAAAATTTAGAGAAGTCAACAGCACTAACACCTCTATTAATTCCGTTGGAACCACAAGTGATGCATATGTCAAATACTAGTTCCAATACTTCATCAAATCCTTTGTATGGATCTTCTGATAGTTTTGGGTATCAAGAACTTCCAAGCAACAGTAAGTGGATCGTGGACCACTTTGTCTGTTCTTCAGAGCTAGGCAGAATCACTGCAAGTAGAACTCGGTTGCCGAGGCTCCCACTATTTGGAGATCCAATTCCAGATGGATGGTTGCTAACAAACACTGAAGACTTGAACATGGATGAACATAGTAAACGCTCTAATGAACTCTCCTCAAGTCTTGCAACATCTCAAACACATCTGGCTATTAGAATGAACAGGTCTGGCTTGGAAATGTGCAGCAATAGAAGGTTTTCTGTGGGTTTCGGTACTAATAGTCCAGCGGTATTCTCACAGGAAATTCTAGCTCAAATTGCATGTTATTCTCTTGAAAATGTGGATCGAGCACACTGTTCAACTGCAGGAATTGAAGCAGGAGCTGGCAAATTACCCTCCAAGAATGGAGTGTTGATGGATGTTAATCCTGAATCAGACATTCAAATGAATTCTAGAATACAAAGCCGTGCAGTTCAAGCAAACGAGACCCGACTGCTGACACTTCTACAACTGGTTGATGAGCAGTACAATCAATGTGTGGATGAGATGCATAGTGTTGTATCTGCCTTCAATGCTGCCACTGAATTGGGCCCCCGAGTCCATGCTCATTTTGCTCGTCAAACAATCTGTCACTTATACAAGAGCTTACAAGAGAGGATTAGTAGTTCTATCCTTGTTGCAGGGTCAAATTTTGACACCTCGTCCACCCAACAGAAGGAAAATTCTTTTGAATCTTCTTATATCCAAATGCGATGGGCCCTTCAGCGGCTGAAAATAGGAGATCGTCACATATGGAGCCCCCAGAGAGGGTTGCCAGAAAAATCCCGTCTCTGTTTTACGTGCTTGGATGTTTCAGATTTTCCCTCACCCTTAGGGTTTTCTTTCAGGTATACTAAAGATGGAGAGAGACATTTGCTGGCTGTGAAAAGTGGATTGACAGAAGCCAGGTTTCCAACTGGTTTAGAAACGCGCGTGTTAAGACTGTGGAAACCAATGATCGAGGAGATATTTGCAGAGATGAACAGAACAAATGCATGTCGGAAAGACCCAGGGAAGCAGACGTGGGATTCGCACAAGCAATAA 1536 0.4303 MEKEKDKLAPEMAARNPPAFNEILSYSSSKLLFLSNSYKFDTDQNNVMGGAAAMANDSIFHNQIESREVFPRLAILDQSAEGVAASASSLDAFLAAKSCLQENLEKSTALTPLLIPLEPQVMHMSNTSSNTSSNPLYGSSDSFGYQELPSNSKWIVDHFVCSSELGRITASRTRLPRLPLFGDPIPDGWLLTNTEDLNMDEHSKRSNELSSSLATSQTHLAIRMNRSGLEMCSNRRFSVGFGTNSPAVFSQEILAQIACYSLENVDRAHCSTAGIEAGAGKLPSKNGVLMDVNPESDIQMNSRIQSRAVQANETRLLTLLQLVDEQYNQCVDEMHSVVSAFNAATELGPRVHAHFARQTICHLYKSLQERISSSILVAGSNFDTSSTQQKENSFESSYIQMRWALQRLKIGDRHIWSPQRGLPEKSRLCFTCLDVSDFPSPLGFSFRYTKDGERHLLAVKSGLTEARFPTGLETRVLRLWKPMIEEIFAEMNRTNACRKDPGKQTWDSHKQ* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01518 511 SMART prehox3 245 373 IPR006563 -
Pte17g01518 511 Pfam Associated with HOX 251 372 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01518 Pte-Chr17 29476920 29480443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01518 195 493 Homeobox Transcription Factor Family AT4G32980 38.679 6.46e-55 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01518 - - jre:109021085 290.041