Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01504 ATGGGTGCTTCTGGAAGATGGGTAAAATCATGGATAGGCCTCAAGAAATCTGATAGAGAAGAAATGAGCAAGGAAGGTGGTAAAGGTAAAAGATGGAAGCTCTGGAGAAGTTCCTCAGGGGAATTGAGTTCATGGAAGGGCTTCAAAGGGAATCACAGACAAGCCTCTGAGGGTTCTGACTCACCACGACTCCCGGATGCCTTTACTGCAGCAGCTACAGTGGTTCGAGGTCCACCCAAAGATTTTCGTGCTGTAAGGGAAGAATGGGCTACAATCAGAATTCAAACTGCGTTCCGCGGCTTCTTGGCAAGAAGGGCTTTAAAAGCTTTGAAAGGTATAGTTAGGCTTCAAGCTCTGGTTCGGGGTCGACAGGTGAGGAAGCAAGCAGCAGTGACATTAAGATGCATGCAGACGTTAGTTCGAGTTCAAGCACGAGTTAGAGCACGTCGTGTGAGGATGTCAATAGAGGGCCAGGCCGTACAAAAGTTGCTCGATGAACGTCGCAGCAAAGATGACCTGAGAGAAGCTGAGGAAGGGTGGTGTGATGGCAAAGGAACTCTTGAGGATGTGAAAACAAAACTACAAATGAGAAAAGAAGGAGCCTTCAAGAGAGAAAGAGCACTAGCATACTCTCTGGCTCAGAAGCAATGGAAATCAACATCTTCATCAAATTCTCAAAATGTAAATTCTGTCTTCTCCCTCAAAAACATTGACTTTGCTAAGAATAGTTGGGGTTGGAGTTGGTTGGAGCGATGGATGGCAGCGAAACCCTGGGAAAGTAGATTGATGGAACAATGCCAAGCAGATTCGGAAAAAACTCCCTCCACGAAGAATTTTGTGAAAGACTGTGACTCTGCAAGCTCCCGGTGCAAACCCTTAGAACCGCCCAGTGTGAAAGTCAAAAGGAACAATGTCACGACAAGGATTTCCGCTAAACCTCCTCAAATTGGGCACGTAACACGTTCATCTTCAAGTCCGAGTTCTGAATTTCGCTATGATGAGAGTTCCGCGTCGTCTTCCATATGCACATCTGCAACTCCAGTATCAGGGAACACTTTGTTCGCATCAGATAGAACAGAGGATAGTTCTAATAGTAGGCCTAACTACATGAACCTTACTGAATCGACCAAGGCAAAACAGAGATCAAGTAAATTATCTCACAGAGCCGAAAGGCAGTCTATGGATGAGTTCCAGTTTGTCAAGAGGTCTGCAACTTTGGCCAATGGAGATTCCAAAAGCAGTGGAGAAGGTCCAGAGCCTCCTTCTGTTAATTTCTCAACGCCACTTTGTTTGCCGACCAGATTAGAGAAGAGTTCAGTCAAACCAAGGAGAGATGGAACGTTCCTTGTGTAA 1353 0.4582 MGASGRWVKSWIGLKKSDREEMSKEGGKGKRWKLWRSSSGELSSWKGFKGNHRQASEGSDSPRLPDAFTAAATVVRGPPKDFRAVREEWATIRIQTAFRGFLARRALKALKGIVRLQALVRGRQVRKQAAVTLRCMQTLVRVQARVRARRVRMSIEGQAVQKLLDERRSKDDLREAEEGWCDGKGTLEDVKTKLQMRKEGAFKRERALAYSLAQKQWKSTSSSNSQNVNSVFSLKNIDFAKNSWGWSWLERWMAAKPWESRLMEQCQADSEKTPSTKNFVKDCDSASSRCKPLEPPSVKVKRNNVTTRISAKPPQIGHVTRSSSSPSSEFRYDESSASSSICTSATPVSGNTLFASDRTEDSSNSRPNYMNLTESTKAKQRSSKLSHRAERQSMDEFQFVKRSATLANGDSKSSGEGPEPPSVNFSTPLCLPTRLEKSSVKPRRDGTFLV* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01504 450 Pfam IQ calmodulin-binding motif 89 108 IPR000048 GO:0005515
Pte17g01504 450 MobiDBLite consensus disorder prediction 380 397 - -
Pte17g01504 450 FunFam IQ-domain 11 86 137 - -
Pte17g01504 450 MobiDBLite consensus disorder prediction 268 283 - -
Pte17g01504 450 MobiDBLite consensus disorder prediction 404 433 - -
Pte17g01504 450 ProSiteProfiles IQ motif profile. 87 115 IPR000048 GO:0005515
Pte17g01504 450 PANTHER IQ-DOMAIN 5-RELATED 1 404 - -
Pte17g01504 450 SMART iq_5 109 130 IPR000048 GO:0005515
Pte17g01504 450 SMART iq_5 86 108 IPR000048 GO:0005515
Pte17g01504 450 Gene3D - 86 139 - -
Pte17g01504 450 ProSiteProfiles IQ motif profile. 111 138 IPR000048 GO:0005515
Pte17g01504 450 MobiDBLite consensus disorder prediction 300 379 - -
Pte17g01504 450 MobiDBLite consensus disorder prediction 41 63 - -
Pte17g01504 450 MobiDBLite consensus disorder prediction 268 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01504 Pte-Chr17 29402780 29404808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01504 1 437 IQD Protein Family AT2G26180 62.415 4.53e-154 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01504 - - rcu:8274544 602.053