Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01496 ATGGTTAACGTTCTTGTCTGCTATTGCTTTCGTGGACGTCTCATGGTCTCGAACTTTATCTGTTTGTTTTTGCTCCTACTGCTACTACTGACCGGTCGAGTCAGGCCGGAGCCGACTCAAGATAAGCAAGCGCTCCTAGCTTTCATCTCTCAAACCCGACATTCAAAACGTGTTCAATGGAATGCAGCTGACTCAACCTGCAATTGGGTTGGAGTGGGTTGCGACCCAAACCGTACCTTTGTTAACACACTTCGTCTTCCCGGTGTTGGTTTAGTCGGTCCAATTCCACCCAACACAATAGGGCGGTTAACTCAGCTCCGAGTTCTCAGTCTTCGCGCCAATCGTATTTCCGGACAGATCCCTTCGGATTTTGCGAATTTGACCTTCCTTCGTAGTCTTTACCTCCAAAACAATCAGCTGTCCGGCAATTTTCCTGCCGGTATCACCCGGTTGACTCGTCTGACTCGGGTTGATCTTTCCTCTAACAACTTCACCGGTTCAATCCCTTTCTCCATCAACAAAATCACCCAGTTGACTGCTCTGCTCTTGGAAAACAATGCGTTCTCCAGTAGCTTACCCAGCATCGCAGCTCAACTGGAGAAATTCAATGTTTCAAATAACCGTCTCAACGGTTCAATCCCTAAAACACTTGCTAAATTCCCAGCTTCCTCATTCAGCGGTAACCTAGATCTCTGTGGCGCACCGTTGCCACCCTGTAACCCCTTCTTTCCTGCTCCAGCCCCATCACCTACTGGAGTTCCGCCACCAACGCCTGTCCAAAAAAAGTCCAAGAAGCTTTCCACACTCGCCATAGTCTTAATTGCAGTTGGCTGTTCTCTATTTCTCTTGCTGTTGCTCCTCCTTCTATTTCTATTTACACGAAAGCGCCAACTTCAGCAGCCACCGAAACCTCCTAATCCTGTGGTGCCGGCTCGTGCTGTACCTGGGGAAGCTGGAACATCCTCATCCAAAGATGACATTACTGGTGGCTCTACAGAGGCTGAGAGGAACAAACTGATGTTCTTTGAAGGAGGGATGTATCGCTTTGATTTGGAGGATTTGTTGAGGGCTTCTGCAGAAGTCTTGGGCAAAGGAAGCGTTGGAACTTCGTACAAAGCAGTGTTGGAAGAAGGTACTACCGTAGTGGTGAAGAGATTGAAGGATGTGGTTGTGACCAAGAAAGAGTTCGAGACGCAAATGGAGGTACTGGGAAAGATCAAACACGACAATGTAGTTCCACTGAGAGCATTTTACTACTCCAAGGATGAGAAATTGCTTGTCTCTGATTACATGGCCGTCGGTAGCTTGTCGGCTCTGCTTCACGGAAGCAGAGGTTCTGGGCGGACACCACTTGACTGGGACACCCGGATAAAAATAGCACTGAGTGCGGCAAGAGGCCTATCTCACCTACACGTGTCCGGAAAAGTAATCCACGGCAATATCAAATCCTCCAACATACTCCTAAAACCCGATCACGATGCATGCGTTTCGGACTTTGGACTCAACCCGCTTTTCGGCACCGCTACACCGCCAAACCGGGCCGCTGGTTATCGGGCTCCCGAGGTGCTTGAAACCCGAAAGGTGACGCCCAAATCGGATGTTTATAGCTTTGGGGTGCTGCTGCTGGAATTGTTGACAGGGAAGGCACCCAATCAAGCTTCGTTAGGAGAGGAAGGCATTGACCTTCCCCGGTGGGTCCAGTCAGTGGTTCGCGAAGAGTGGACCGCTGAGGTCTTCGATGTAGAGCTAATGAGGTACCATAACATTGAAGAAGAGATGGTTCAGCTTTTGCAGATTGCAATGGCGTGTGTTTCTGTAGTGCCTGATCAGAGACCGGAAATGAGAGAAGTGGTGCGTATGATGGAGGATATGAATAGAGGGGAAACTCCGGATGATGGGTTACGGCAGTCGTCAGATGATCCATCTAAAGGATCTGACGATCATACGCCTACAGAGTCAAGAACACCCCCTACATCAGTGACTCCATAA 1989 0.4927 MVNVLVCYCFRGRLMVSNFICLFLLLLLLLTGRVRPEPTQDKQALLAFISQTRHSKRVQWNAADSTCNWVGVGCDPNRTFVNTLRLPGVGLVGPIPPNTIGRLTQLRVLSLRANRISGQIPSDFANLTFLRSLYLQNNQLSGNFPAGITRLTRLTRVDLSSNNFTGSIPFSINKITQLTALLLENNAFSSSLPSIAAQLEKFNVSNNRLNGSIPKTLAKFPASSFSGNLDLCGAPLPPCNPFFPAPAPSPTGVPPPTPVQKKSKKLSTLAIVLIAVGCSLFLLLLLLLLFLFTRKRQLQQPPKPPNPVVPARAVPGEAGTSSSKDDITGGSTEAERNKLMFFEGGMYRFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFETQMEVLGKIKHDNVVPLRAFYYSKDEKLLVSDYMAVGSLSALLHGSRGSGRTPLDWDTRIKIALSAARGLSHLHVSGKVIHGNIKSSNILLKPDHDACVSDFGLNPLFGTATPPNRAAGYRAPEVLETRKVTPKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMACVSVVPDQRPEMREVVRMMEDMNRGETPDDGLRQSSDDPSKGSDDHTPTESRTPPTSVTP* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01496 662 Pfam Protein kinase domain 359 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01496 662 Gene3D Ribonuclease Inhibitor 38 196 IPR032675 -
Pte17g01496 662 Gene3D Transferase(Phosphotransferase) domain 1 431 640 - -
Pte17g01496 662 SUPERFAMILY L domain-like 64 220 - -
Pte17g01496 662 CDD STKc_IRAK 362 624 - -
Pte17g01496 662 MobiDBLite consensus disorder prediction 622 650 - -
Pte17g01496 662 Pfam Leucine rich repeat 95 140 IPR001611 GO:0005515
Pte17g01496 662 ProSiteProfiles Protein kinase domain profile. 356 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01496 662 SUPERFAMILY Protein kinase-like (PK-like) 360 621 IPR011009 -
Pte17g01496 662 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 431 633 - -
Pte17g01496 662 Gene3D Phosphorylase Kinase; domain 1 323 430 - -
Pte17g01496 662 FunFam pollen receptor-like kinase 1 325 430 - -
Pte17g01496 662 MobiDBLite consensus disorder prediction 298 331 - -
Pte17g01496 662 MobiDBLite consensus disorder prediction 622 662 - -
Pte17g01496 662 Gene3D Ribonuclease Inhibitor 198 239 IPR032675 -
Pte17g01496 662 FunFam Probable inactive receptor kinase RLK902 38 196 - -
Pte17g01496 662 PANTHER OS05G0588300 PROTEIN 21 635 - -
Pte17g01496 662 Pfam Leucine rich repeat N-terminal domain 39 75 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01496 Pte-Chr17 29331583 29335638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01496 15 648 Receptor kinase-like Gene Family AT5G58300 52.100 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte17g01496 Pkinase 1.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01496 - - qsa:O6P43_023032 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g01496 17 29331583 29335638 Pte17g01496 17 29331583 29335638 RCT
Pte17g01496 17 29331583 29335638 Pte15g01161 15 8825669 8827066 RCT