Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01494 ATGGCATTTCATTCCGAACTCGCCCTAGACTGCAAACCCCACAGTTTCTCCATGCTACTGAAATCCTTTGGAGAACAGATTGATCAAACCAACAACCTTGAAGAGTTTCTTTCGCGGCTAGAGGAAGAGCGCCTCAAGATTGATGTTTTCAAGCGCGAGCTCCCTCTTTGCATGCATCTTCTTACCAATGCGATGGAGGCTTCAAGGCAGCAACTGCAGGCATTTAGAGCAAACCAGGGTGCAAGGCCAGTCCTCGAAGAATTTATACCAATAAAGCGTTCCAACACTGATGGTCGAGAAAAGGCTTCTGATAAGGCCAATTGGATGACAACAGCTCAACTGTGGAGCCAAGCAAGTGAAGGAGCAAAACCGCAGTCTATAATCCTGTCACCCCAGGAGCCAGATTTTGGATTCAATGTCGGCTCAAAACTGGATATAGAAGCTAAGCAGAGAAATGATGGAGCCTTTATTCCCTTCTCAAAAGAAAGTAACTCTAGTGCAGGCTCACCAATCGGAGCTCTTCCTGAGTTGGCTCTTGCACCATCTGAGCAAGATACTCGAGACAAGAAATTTTCAGAGCCTGATAAGAATGGAGTTTCGTGTCCAGCTGAGAGGGAGACCTTTTCCAAAGGCGGTACTAGTCACTCAGATGGCCAGACAACAACTATCAACAGTAGTAGCCAAACTCATAGGAAAGCAAGGAGGTGTTGGTCCCCAGATCTACACAGGCAATTTGTGAATGCCCTGCAGATGCTTGGAGGTTCTCAAGTGGCTACCCCAAAACAGATTAGAGAATTGATGAAGGTTAAGGGTTTGACCAATGATGAAGTTAAAAGCCATCTCCAGAAATACAGACTGCACACTAGACGACCTAGTCCAAGCCCACAAGCGACCGGAGGAGCTGGCCCTCAGCTGGTAGTTCTGGGAGGCATCTGGGTTCCACCGGAGTATGCTACAGCAGCAGCAGCTGCTGCACATAATGGTAACCCTACCATCTACAGTCCACACCCAGCATCGCATGCAGCAGTAGTACCACCACACTACTGTGCTGCCGCCACCCCCGTCGCTCAGGAATTCTATGCAGCTACATCTCCGCAGCCTCCACCGGCCCATCACCTCCCCCTTCATCACCAGGTCCACATGTTTAACAAAGCTACGTGTCACGCCCACAGTGCACCAGATTCTGACATCAAAGGAGGCGGTGAAAGGTCCGAGAGCATTGAAGATGGCAAGTCCAAGAGCAGTAGCTGGAAAAATGAGAGTTGTGAGAACGGAGTAGAGAGAAAAAGATTGGCAGCCCTCAGGGAAGAAGGGGAGGAGAGCAATGGCAGTGAGATCACACTCAAATTCTAA 1353 0.4915 MAFHSELALDCKPHSFSMLLKSFGEQIDQTNNLEEFLSRLEEERLKIDVFKRELPLCMHLLTNAMEASRQQLQAFRANQGARPVLEEFIPIKRSNTDGREKASDKANWMTTAQLWSQASEGAKPQSIILSPQEPDFGFNVGSKLDIEAKQRNDGAFIPFSKESNSSAGSPIGALPELALAPSEQDTRDKKFSEPDKNGVSCPAERETFSKGGTSHSDGQTTTINSSSQTHRKARRCWSPDLHRQFVNALQMLGGSQVATPKQIRELMKVKGLTNDEVKSHLQKYRLHTRRPSPSPQATGGAGPQLVVLGGIWVPPEYATAAAAAAHNGNPTIYSPHPASHAAVVPPHYCAAATPVAQEFYAATSPQPPPAHHLPLHHQVHMFNKATCHAHSAPDSDIKGGGERSESIEDGKSKSSSWKNESCENGVERKRLAALREEGEESNGSEITLKF* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01494 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 229 289 IPR017930 -
Pte17g01494 450 MobiDBLite consensus disorder prediction 207 230 - -
Pte17g01494 450 SUPERFAMILY Homeodomain-like 229 290 IPR009057 -
Pte17g01494 450 MobiDBLite consensus disorder prediction 395 427 - -
Pte17g01494 450 Gene3D - 231 289 - -
Pte17g01494 450 MobiDBLite consensus disorder prediction 182 230 - -
Pte17g01494 450 Pfam Myb-like DNA-binding domain 234 285 IPR001005 -
Pte17g01494 450 Coils Coil 33 53 - -
Pte17g01494 450 FunFam Myb family transcription factor 231 289 - -
Pte17g01494 450 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 418 IPR044787 GO:0003700|GO:0006355
Pte17g01494 450 MobiDBLite consensus disorder prediction 387 427 - -
Pte17g01494 450 NCBIfam myb-like DNA-binding domain, SHAQKYF class 232 287 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01494 Pte-Chr17 29319895 29322158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01494 1 451 G2-like Transcription Factor Family AT2G03500 49.583 4.92e-126 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte17g01494 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01494 - - dzi:111286219 566.614