Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01493 ATGGGGCCATACAATTCTGCAACCTCCCCCATAAGCAGAAATGGTAGTTCTTCCTCTTCTTCCTCTTCAGACAAACTGGTCGCGCCGGAAATCGATGGTCATCTCGCAGGTGCGGGTTATAGAGTCCGTGCTTCTGAGCTCCTTCAAGTCGCTCAGCGCCTCGAACGTCTTGAAAACGCTATGGTCAACTCCAACGCTGAGATTTCTCAGCTGGCTTCGGATGCCGTCCATTACAACCCTTCTGATATGGCTTCCTGGGTTGACTCTCTACTCTCTGAGTTAAACCAGACCGACTCTTTGCCTTCCGATCTGTCGGATATTGTCCTTGGCCCCACGTTGAATCAAACCGAAACGTTAGTCCACGATGACTGGATCGACCATAATACTATGGATCATACACCGCTTCCACAACAGCAGCAGCAGTTGACGGTTGTGACGGCTATGGAAGAAGACTCGGGAATTCAGTTGGTGCACATGCTCATGACCTGTGCCGGTTCTCTCCAACGTGGCGAGTTAGCATTAGCTGGTTCTTTGGTGGACGACATGCAACGCCTTCTGACTCGTGTCAACACCACTTGTGGTATCGGCAAAGTAGCTGGCTATTTCATTGACGCACTGAGCCGTCGTATCTTTTCGCCACAAGGTGCCGGCAACTGCACGGCCGGCGCACCTTATGAAAATGAAGTTCTCTACCACCATTTCTATGAAGCTTGCCCGTACCTTAAATTCGCTCACTTCACAGCGAACCAAGCCATCCTCGAAGCCTTCAGTGGCCATGATTGCGTCCACGTTATTGATTTCAACCTCATGCACGGCCTGCAATGGCCGGCTCTCATCCAGGCCCTGGCGTTACGTCCGGGTGGGCCCCCAACTCTTCGATTGACAGGTATTGGACCACCCTCCCCAGACGGACGTGACTCGCTTCGTGAAATCGGATTGCGACTGGCCGAATTGGCAAGATCCGTCAACGTCAAATTCACTTTCCGCGGAGTGGCGGCTTCGCGCCTTGAAGATGTAAAGCCTTGGATGCTCCAAATCCGAGCTCAAGAAGCAGTGGCAGTCAACTCCATCATGCAGCTTCACCGGCTAATCGGTAGTGACCCAATTCGAAATTCAGCAATTGATATGGTTCTTGGGTGGATCCGAACGCTGAACCCGAAAATCATGACAGTTGTAGAGCAAGAAGCCAACCATAATCAACCGAGTTTTCTAGACCGTTTCACGGAAGCTCTCTACTATTACTCAACCATGTTTGATTCCCTTGAATCATGTCCTCTACAACCAGAGAAAGCTTTGGCTGAGATATACATACAAAGAGAGATATGTAATATTGTTTACTGCGAAGGAACTGCACGAATAGAGAGACACGAACCGCTTGCTAAGTGGAGGGATCGACTAGGGAAAGCTGGGTTCAGACCTTTGCATCTGGGTTCGAATGCATTCAAGCAAGCAAGTATGCTGTTGAGTCTATTTTCGGCCGAGGGTTACTGTGTGGAAGAGGTAGAAGGGTGTTTAACCTTAGGGTGGCATAGCCGGCCTCTCATCGCCGCTTCGGCTTGGCAGGCGGCGCCCGCACCGGAAACGAATGGAGCACCGTTAGGTACCGTAGCCAATCAGAGTAGGAGTTGTAATTACAGTGGTGATGGTAACCAATTTTTGTGA 1662 0.506 MGPYNSATSPISRNGSSSSSSSSDKLVAPEIDGHLAGAGYRVRASELLQVAQRLERLENAMVNSNAEISQLASDAVHYNPSDMASWVDSLLSELNQTDSLPSDLSDIVLGPTLNQTETLVHDDWIDHNTMDHTPLPQQQQQLTVVTAMEEDSGIQLVHMLMTCAGSLQRGELALAGSLVDDMQRLLTRVNTTCGIGKVAGYFIDALSRRIFSPQGAGNCTAGAPYENEVLYHHFYEACPYLKFAHFTANQAILEAFSGHDCVHVIDFNLMHGLQWPALIQALALRPGGPPTLRLTGIGPPSPDGRDSLREIGLRLAELARSVNVKFTFRGVAASRLEDVKPWMLQIRAQEAVAVNSIMQLHRLIGSDPIRNSAIDMVLGWIRTLNPKIMTVVEQEANHNQPSFLDRFTEALYYYSTMFDSLESCPLQPEKALAEIYIQREICNIVYCEGTARIERHEPLAKWRDRLGKAGFRPLHLGSNAFKQASMLLSLFSAEGYCVEEVEGCLTLGWHSRPLIAASAWQAAPAPETNGAPLGTVANQSRSCNYSGDGNQFL* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01493 553 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 126 517 IPR005202 -
Pte17g01493 553 SMART DELLA_2 32 104 - -
Pte17g01493 553 Pfam Transcriptional regulator DELLA protein N terminal 32 98 IPR021914 -
Pte17g01493 553 Gene3D - 30 94 IPR038088 -
Pte17g01493 553 ProSiteProfiles GRAS family profile. 147 521 IPR005202 -
Pte17g01493 553 Pfam GRAS domain family 156 521 IPR005202 -
Pte17g01493 553 Coils Coil 47 74 - -
Pte17g01493 553 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01493 Pte-Chr17 29312666 29314750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01493 31 521 GRAS Transcription Factor Family AT1G14920 49.225 2.94e-164 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte17g01493 GRAS 3.6e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01493 K14494 - jre:109006296 817.379