Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01482 ATGGCTACCACTATCAAAGCTAAAGATGAATCTGATTATGATAGTAGCTGTTCGTCCATAACCATGCCAGACTCTAGTCGCAGCTGGATGAGTCACCTGAGCTACAGCAGCCGTCGTCGCAGCTCTGTTTCTCTCTGTTCTTCAACAGAGACATCTCTTTTCCTCAGCTCCCATAGTAAACCTCACAAGGCTAACCAAGTTGCATGGGAGGCCATTAGCAGGCTTCGCTGTACCAAAGGCCAATTTGGACTCCACCACTTTCGAATTTTGCGAAGGCTTGGCAGTGGTGACATAGGAAATGTCTACCTCTGCCAGATAAGAAACCCCGTTGAGGGTATGGCACCATGTCTTTTTGCCATGAAAGTTGTGGACAGAGAAGCACTTGCAATCAGAAACAAATTGCAGAGAGCTGAGATGGAGAAAGAGATTTTGGGTATGCTTGATCACCCATTTCTCCCAACCTTGTATGCAGAGTTTGAAGCCTTTCATTATTCTTGCTTGGTCATGGAGTTCTGTCCAGGTGGAGACCTATATGTTGCAAGGCAGCGCCAACCCAGGAAACGCTTCAGCATTTCATCTGCTAAGTTTTATGCAGTTGAGGTACTGCTGGCTTTGGAATATCTTCATATGATGGGTATTGTGTACAGAGACCTGAAGCCGGAGAATGTGTTGGTAAGAGAGGATGGCCATATAATGCTTTCGGATTTTGACCTTTCTCTAAAGTGTGAAGTTGTCCCCAAGCTTCTCAAGTCCAAAGCATGTTTGCAAACCTGTCACAACGAGAGTGAAAAAAGCTCCATATCCGTTTGTGCTTCTCCTATACGGCCTGTAATTTCATGTTTCTCAGCCTTCGGTAAGAAAAAGAAAGCACAAGTAGTAACAACCATAACTGAAGTTGCTGATGCAGATGGGCTTGATCCTGAACTAGTAGCAGAACCCATCCATGCTCGTTCCAAATCTTTCGTCGGAACACACGAGTACTTAGCACCTGAGGTGATTTGTGGCCAAGGTCATGGGAGTGCAGTGGATTGGTGGACTTTAGGAGTGTTCTTGTATGAAATTATATACGGAAGAACTCCATTCAAAGGTGAAAACAACGAGAAAACCCTTGTCAACATTCTAAAACAGCCATTAGCGTTTCCAAGAACTGGGGTTAGCAGCAGCAAAGAGTTTGAAGAAATGGTCAGAGTTCAAGATCTGATAAGCAAGCTCTTAGTGAAAAACTACAAAAAGAGAATGGGAAGCTCTAGAGGTTCTGTTGAGATCAAGAGGCATGAGTTCTTCAAGGGTGTAAATTGGGCTTTGATCAGGTCTGTAAGGCCACCAGAGGTCCCTCGTGACATGCACAGAATTAAGAGTAGAGTTCTGTTGCCGAAGTTAAGCAAAAAAGAACTGGACGAGCCATTTCAGATCCATCATCATTTTGATTACTTCTAA 1437 0.4426 MATTIKAKDESDYDSSCSSITMPDSSRSWMSHLSYSSRRRSSVSLCSSTETSLFLSSHSKPHKANQVAWEAISRLRCTKGQFGLHHFRILRRLGSGDIGNVYLCQIRNPVEGMAPCLFAMKVVDREALAIRNKLQRAEMEKEILGMLDHPFLPTLYAEFEAFHYSCLVMEFCPGGDLYVARQRQPRKRFSISSAKFYAVEVLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCEVVPKLLKSKACLQTCHNESEKSSISVCASPIRPVISCFSAFGKKKKAQVVTTITEVADADGLDPELVAEPIHARSKSFVGTHEYLAPEVICGQGHGSAVDWWTLGVFLYEIIYGRTPFKGENNEKTLVNILKQPLAFPRTGVSSSKEFEEMVRVQDLISKLLVKNYKKRMGSSRGSVEIKRHEFFKGVNWALIRSVRPPEVPRDMHRIKSRVLLPKLSKKELDEPFQIHHHFDYF* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01482 478 ProSiteProfiles Protein kinase domain profile. 87 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01482 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Pte17g01482 478 FunFam protein kinase PINOID 2 85 171 - -
Pte17g01482 478 Gene3D Transferase(Phosphotransferase) domain 1 172 241 - -
Pte17g01482 478 CDD STKc_phototropin_like 85 446 - -
Pte17g01482 478 Pfam Protein kinase domain 88 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01482 478 Pfam Protein kinase domain 318 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01482 478 SMART serkin_6 87 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01482 478 SUPERFAMILY Protein kinase-like (PK-like) 66 448 IPR011009 -
Pte17g01482 478 Gene3D Phosphorylase Kinase; domain 1 85 171 - -
Pte17g01482 478 Gene3D Transferase(Phosphotransferase) domain 1 316 446 - -
Pte17g01482 478 FunFam protein kinase PINOID 172 240 - -
Pte17g01482 478 FunFam serine/threonine-protein kinase D6PK-like 316 446 - -
Pte17g01482 478 Coils Coil 120 140 - -
Pte17g01482 478 PANTHER FLIPPASE KINASE 1-RELATED 34 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01482 Pte-Chr17 29218578 29220697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01482 9 479 AGC Kinase Gene Family AT2G26700 58.286 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte17g01482 Pkinase 1.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01482 K08286 - qsu:112027986 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g01482 17 29218578 29220697 Pte17g01482 17 29218578 29220697 RCT