Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01477 ATGGATAAGGAGAAGTCCCCTGGTTATGGCGGTGGATTTCCACCGCCTTCAGGCCGTTATTCTAGTTTTTCTCCACCTGGTAGTGGTAATTTTAATGTGAAACTAGAGCCATCATCCTCTTCATTTCCACCACCTGTGCCCGGTACTGGTTCAGACTCTGGTCACTTTGGACAAGGAATGCCCAACGACTCAAATGGCTTTACCCACGATATCAGCAAAATGCCTGACAATCCTCAGAGAAAAATAGGTCATAGGCGTGCCCATTCGGAGATTCTCACCCTTCCAGATGACATTAGTTTCGATAGTGACCTAGGTGTGGTGGGAGCTGGGGATGGGCCTTCATATTCCGATGACACTGAAGAAGACATACTTTCTATGTACCTCGATATGGAAAAGTTCAATTCATCATCTGCTACATCAGCCTTTCAATTAGGAGACTCCTCATGTTCAGCTTTGGCGTCAATGACTGCTCCAGCATTGCAAAGAGCGTCCTCTGGTGTGGAAAACATTAAGATTGGTACACAAGACAGGCCTAGAATAAGACACCAGCATAGCCAGTCTATGGATGGATCGACCACAATCAAACCAGAGATGCTTGTCTCAGGTTCCGAAGAGATGTCTGCTGCTGATTCTAAGAAAGCTATGTCAGCCGCTAAGCTTGCCGAGCTTGCTCTTATTGATCCCAAGCGTGCCAAGAGGATATGGGCAAATAGGCAGTCTGCTGCTAGGTCCAAAGAGAGGAAGATGCGATATATAGCTGAGCTCGAAAGGAAAGTCCAGACATTGCAAACAGAAGCAACGTCACTGTCTGCCCAATTGACGCTACTGCAGCAGAGAGATACAAATGGGTTGAATGCTGAAAACAGTGAACTGAAGCTGCGTTTACAGTCCATGGAGCAGCAGGTCCACTTGCAAGATGCACTAAATGATGCATTGAAAGAGGAAATTCATCATTTGAAGATATTGACTGGTCAAGCGATGCCAAATGGGACACCAATGATGAATTTTGGTGCTTCATTTGGTGGTGGGCAGCAATTTTATCCCAACAATCAAGCAGCGCACGCCCTGTTAGCTACACAGCAGCTTCAACAACTTCAGATACACTCTCAGAAACAGCAGCAACAATTTCAGCTGGAGCAGCTGCAACAACTTCAACAGCAACAAATGCAAGCACAGCAGGAACAGCAGCAGCTAACTGGGGACCTGAAAATCAGAGTTTCTCCATCCGCTGATAGCTTGAAGGAGAATGCGGCAGCAGATATGAACTCTTCCTCAACAAATGATTCTTAA 1290 0.462 MDKEKSPGYGGGFPPPSGRYSSFSPPGSGNFNVKLEPSSSSFPPPVPGTGSDSGHFGQGMPNDSNGFTHDISKMPDNPQRKIGHRRAHSEILTLPDDISFDSDLGVVGAGDGPSYSDDTEEDILSMYLDMEKFNSSSATSAFQLGDSSCSALASMTAPALQRASSGVENIKIGTQDRPRIRHQHSQSMDGSTTIKPEMLVSGSEEMSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQQRDTNGLNAENSELKLRLQSMEQQVHLQDALNDALKEEIHHLKILTGQAMPNGTPMMNFGASFGGGQQFYPNNQAAHALLATQQLQQLQIHSQKQQQQFQLEQLQQLQQQQMQAQQEQQQLTGDLKIRVSPSADSLKENAAADMNSSSTNDS* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01477 429 Coils Coil 281 315 - -
Pte17g01477 429 Coils Coil 245 279 - -
Pte17g01477 429 SUPERFAMILY Leucine zipper domain 229 278 IPR046347 GO:0003700|GO:0006355
Pte17g01477 429 MobiDBLite consensus disorder prediction 22 39 - -
Pte17g01477 429 SMART brlzneu 225 290 IPR004827 GO:0003700|GO:0006355
Pte17g01477 429 Gene3D - 228 303 - -
Pte17g01477 429 Pfam bZIP transcription factor 229 277 IPR004827 GO:0003700|GO:0006355
Pte17g01477 429 MobiDBLite consensus disorder prediction 55 72 - -
Pte17g01477 429 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 227 291 IPR004827 GO:0003700|GO:0006355
Pte17g01477 429 MobiDBLite consensus disorder prediction 1 82 - -
Pte17g01477 429 FunFam probable transcription factor PosF21 228 282 - -
Pte17g01477 429 MobiDBLite consensus disorder prediction 392 429 - -
Pte17g01477 429 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 18 397 - -
Pte17g01477 429 CDD bZIP_plant_RF2 230 279 IPR044759 GO:0003700|GO:0006355
Pte17g01477 429 Coils Coil 367 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01477 Pte-Chr17 29176237 29179034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01477 19 358 bZIP Transcription Factor Family AT1G06070 70.588 1.47e-160 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte17g01477 bZIP_1 1.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01477 - - qsu:112034768 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g01477 17 29176237 29179034 Pte17g01477 17 29176237 29179034 RCT