Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01469 ATGTGTTACTATTTGTCTGTGCAGCCTAAGCAAATACATGAGATTAAGGATTTCCTTCTCACTGCCAGAAGGAAAGATGCACTCTCTGTGAGAATCAAGAGGAGAAAAGATGTTGTCAAGTTCAAGGTTAGGTGTTCCAAGTATCTCTATACACTTTGTGTGTTTGACTTAGAGAAAGCTGAAAAGCTGAAGCAATCTCTACCCCCAGGTTTGAGTGTAGACGATGTCTGA 231 0.4069 MCYYLSVQPKQIHEIKDFLLTARRKDALSVRIKRRKDVVKFKVRCSKYLYTLCVFDLEKAEKLKQSLPPGLSVDDV* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01469 76 Gene3D - 8 76 IPR038464 -
Pte17g01469 76 PANTHER 60S RIBOSOMAL PROTEIN L38 9 75 IPR002675 GO:0003735|GO:0005840|GO:0006412
Pte17g01469 76 FunFam 60S ribosomal protein L38 8 76 - -
Pte17g01469 76 Pfam Ribosomal L38e protein family 9 76 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01469 Pte-Chr17 29133992 29135137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01469 9 77 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 86.957 1.17e-38 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01469 K02923 - egt:105954017 119.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g01469 17 29133992 29135137 Pte17g01469 17 29133992 29135137 RCT