Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01468 ATGGACATATCTTTTTACACAGCGAAAGACACTGCTTCAGATCGTTGCTTTCACTCCAGTCAGGTCCTGCAACAGCATCAGCAGCATATCAGCAATGGTAATCACGCCGCGGCCATAGACATGCAAAGCGCCAATCAACAGCTCCAAAGTTGTCACACATTAACAACCAGCCGTTCCTCGGATTTAAGTTTGAGCGAACATCATCAACCTTGTGCAAGTGCGACCACTGCTGCAGGCAGATGGGCCTCACAGCTTCTTAGGGAGTGTGCAACGGCAATCTCCGAAATGGACTCCACCAAGATCCACCACCTCCTGTGGATGTTGAACGAGCTTGCTTTCCCATATGGCGACTGTGATCAAAAGTTAGCTTCTTATTTCTTGCAAGCTCTTTTCTGCAAAGCCACGGACTCCGGCCAACGGTGCTATAAGACTCTAACTTCCGTCTCTGAGAAAAACCACTCCTTCGATTCAGCTCGGAAATTGATACTGAAATTTCAAGAGGTAAGCCCTTGGACAACTTTCGGACATGTTGCCTCAAACGGTGCCATTTTGGAAGCGTTAGAAGGAGAGACTAAGCTTCATATAATCGACATAAGCTACACCCTGTGCACTCAGTGGCCTACCTTGTTAGAAGCCTTGGCCACAAGAAATGACGAGACACCCCATTTGAAACTCACCCTTGTGCTCACCACAAACATACAATGGCCAGTCATGAAAGAAGTAGGTCAAAGAATGGAGAAGTTTGCTAAATTAATGGGAGTGCCATTTGAGCTTAATGTTATTAGTGGGCTAAACAATTTGGGAGAGCTCAACCAAGAGGGATTAGGAGTTCAAGAGGACGAAGCTGTTGCAATAAATTGCATTGGGGCTTTGAGAAGAGTAAAGGTTGAGGAAAGAGAGGGTTTGATCCAGATGTTTCACTCATTTAGACCACGAGTTGTGACAGTTGTTGAGGAAGAAGCTGATTTTTCTACCACAAGAAATGACTTCGTCGACACCTTTGAAGAGTGCCTTCGGTTTTATACTTTATACTTCGAGATGCTAGAGGAAAGTTTCTCCCCAACGAGTAATGAGAGATTGATGTTGGAGAGGGATTGCTCCAGAAGCATTGTTAGGGTTTTGGCTTACAGTGATGAATATGGTGTTGGAGAGTGTGAGAGGAGGGAGAGAGGAAGCCAATGGTCTGAGAGGCTTAAAGACGCATTTTCTCCAGCTGGATTCAGTGAAGATGTTGTTGATGATGTCAAGGCATTGCTGAAGAGGTACAAAGCTGGATGGTCACTTTCGCTGCCCCAAGGAGACGACTCGAGATCAGAAATTTACTTGACATGGAAGGACGAACCTGTAGTTTGGGCATCAGCTTGGAAACCCTAA 1374 0.4571 MDISFYTAKDTASDRCFHSSQVLQQHQQHISNGNHAAAIDMQSANQQLQSCHTLTTSRSSDLSLSEHHQPCASATTAAGRWASQLLRECATAISEMDSTKIHHLLWMLNELAFPYGDCDQKLASYFLQALFCKATDSGQRCYKTLTSVSEKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHIIDISYTLCTQWPTLLEALATRNDETPHLKLTLVLTTNIQWPVMKEVGQRMEKFAKLMGVPFELNVISGLNNLGELNQEGLGVQEDEAVAINCIGALRRVKVEEREGLIQMFHSFRPRVVTVVEEEADFSTTRNDFVDTFEECLRFYTLYFEMLEESFSPTSNERLMLERDCSRSIVRVLAYSDEYGVGECERRERGSQWSERLKDAFSPAGFSEDVVDDVKALLKRYKAGWSLSLPQGDDSRSEIYLTWKDEPVVWASAWKP* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01468 457 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 68 449 IPR005202 -
Pte17g01468 457 Pfam GRAS domain family 84 456 IPR005202 -
Pte17g01468 457 ProSiteProfiles GRAS family profile. 73 456 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01468 Pte-Chr17 29130095 29131468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01468 63 457 GRAS Transcription Factor Family AT4G37650 50.847 2.26e-138 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte17g01468 GRAS 2.1e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01468 - - pop:18106876 640.188