Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01444 ATGGCGTATCAGAATCATCCCCACCTCTCCCAAGACCTTCCACTCCCTCACTTTACGGACCAACATCAGCAGAGTACTCAGCATCCTATGCACACTGATACCAACCTCCGCACCATCTTAGACTCTTCATCCGACCCTACCTCTTCAAAACCTGGCTCAGACCCTCACCCCCACCACCCACTTCAGACCGCACCCAATTGGCTAAACAACGCTCTCCTTCGTGCTCAATACGGTGATAGCAACAACGGTAACAACCAGAACAGCTCCCATAATAACAATACCAACAACGGCGGTGCCACCAACAACAATAACAACGGTAATAATTTCCTCAACCTCCACACCACCGCCTCAGAATCTACTGGTGCCGCTCCTCATACGTCAAACCAATGGCTCTCTCGTCCGATCCTACACCTTAAGCAAAGTGACGTCATCGACGATGTCACCGTAGCTGCTGGCGACTCCATCATAGCCGGTGCCGCCTTATCCCATGACTCCGCCGGCTTCAACGCAGCCAGTGATACCCTCCAGAGCAAACCGGACGCGGTTGTTGAAGACAGCGGCGGCGGTCGAGGAGGAGATTCTGGGTTGGTGAACTGGCAGAATGCTAGCTACAAAGCGGAGATTTTATCTCACCCTCTGTACGAACAGCTGTTGTCGGCACACGTGGCGTGCCTCCGAATTGCCACCCCTGTCGACCAGTTGCCGAGAATCGATGCTCAACTGGCGCAGTCAGAAAATGTGGTGGCTAAGTACTCGACCTTAGGACATGCCGGTCAGACCATAGTTGGGGATGATAAGGAGCTCGACCAGTTCATGTCGCACTATGTTCTGTTGCTTTGTACCTTTAAAGAGCAACTACAACAGCATGTCCGGGTCCATGCAATGGAAGCAGTGATGGCTTGCTGGGAGATAGAGCAATCTTTGCAAAGTTTAACAGGTCCGATCATTAATCTGTCGTACCTTCATATCTCTTGA 975 0.5179 MAYQNHPHLSQDLPLPHFTDQHQQSTQHPMHTDTNLRTILDSSSDPTSSKPGSDPHPHHPLQTAPNWLNNALLRAQYGDSNNGNNQNSSHNNNTNNGGATNNNNNGNNFLNLHTTASESTGAAPHTSNQWLSRPILHLKQSDVIDDVTVAAGDSIIAGAALSHDSAGFNAASDTLQSKPDAVVEDSGGGRGGDSGLVNWQNASYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSENVVAKYSTLGHAGQTIVGDDKELDQFMSHYVLLLCTFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGPIINLSYLHIS* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01444 324 SMART KNOX1_2 202 246 IPR005540 GO:0003677|GO:0005634
Pte17g01444 324 MobiDBLite consensus disorder prediction 1 64 - -
Pte17g01444 324 SMART KNOX2_2 258 313 IPR005541 GO:0003677|GO:0005634
Pte17g01444 324 Pfam KNOX2 domain 262 312 IPR005541 GO:0003677|GO:0005634
Pte17g01444 324 Pfam KNOX1 domain 204 245 IPR005540 GO:0003677|GO:0005634
Pte17g01444 324 MobiDBLite consensus disorder prediction 16 51 - -
Pte17g01444 324 MobiDBLite consensus disorder prediction 76 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01444 Pte-Chr17 28989847 28993712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01444 1 313 Homeobox Transcription Factor Family AT5G25220 50.000 2.04e-82 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01444 - - qsa:O6P43_019260 407.142