Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01441 ATGGCCAGGCCACAACAGCGATACCGAGGCGTTCGACAAAGGCATTGGGGATCGTGGGTCTCTGAAATTCGTCACCCTCTGTTGAAGACTCGAATTTGGTTAGGCACTTTTGAAACGGCTGAAGATGCAGCTAGAGCATACGATGAAGCAGCAAGATTAATGTGTGGTCCTAGAGCTAGAACCAATTTCCCATACAATCCCAATGCATCACAATCGTCATCTTCAAAGCTTCTGTCAGCTACTTTGACTGCTAAACTTCATAGGTGCTACATGGCTTCCCTGCAAATGACCAAACCAACAACAAAAGAGCGTCAAAGAGTAATTTCACCAAGTTATATATCTGCAAGCACCGGTACTGTTGAGAGAACAATCGAACAAGATAAACGGTTGCCAGATAAAAAAACAATGGCAGACCAAGAAGAAGAGTCCAACTGGGTCGTCAAGACAGTTCAAGTGGAAAATACCCCTCATTTCAAGATTCTCGAGGAAGACCATATACAGCAAATGATAGAAGAGTTGCTTGACTATGGCTCTATTGAACTCTGTCCTGCCATGCTCCCTCGAGCACTGTGA 573 0.4468 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQMTKPTTKERQRVISPSYISASTGTVERTIEQDKRLPDKKTMADQEEESNWVVKTVQVENTPHFKILEEDHIQQMIEELLDYGSIELCPAMLPRAL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01441 190 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Pte17g01441 190 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 125 - -
Pte17g01441 190 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Pte17g01441 190 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Pte17g01441 190 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Pte17g01441 190 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Pte17g01441 190 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Pte17g01441 190 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Pte17g01441 190 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Pte17g01441 190 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01441 Pte-Chr17 28955974 28956855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01441 1 187 AP2-EREBP Transcription Factor Family AT5G25190 65.775 8.11e-77 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte17g01441 AP2 8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01441 - - qsa:O6P43_019253 273.863