Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte17g01438 | ATGGAAAATCTTGGAAAAGAAGGAACCCTTCCCGATAAGCCAAGCATCCTGGCTTGTATTGTTGCTCCTCCATGTGTCAACGCACCATTGCAGAATCCTGCAGAGAAGAAGCAGAAGCTTGTTGAAGAGGATGAAGAAGAAAAGGAGCAACAGAAGGAGGAAAAGCAAGTTTCGTTGTTAGATCTGAACATTTCTTGTGATGTAGGGACCAGGAGTTGTGATCTCAATCTGAATCTGTCGACAACAATTTCATCCGAAACCCCTCAAGCTTCTGCAGATGAACCCCGGTTTTTCTCTTGCAACTATTGCCACAGAAAGTTTTATAGTTCACAGGCACTGGGAGGACATCAAAATGCTCACAAGCGAGAGAGGACTTTAGCAAGAAGAGGACAGAAGTTAGGAGCACAGATGATGGCTTCTGCAGCTGCTTTTGGACTCCATCCTTTTCTGCATGGTGAAGGCGATTCAAGCTTGGCTTCTTTACCTTTATATGGTGTCTGTCATAGACCTCTGGGAATTCAAGCTCACTCGATGATCCATAAGCCTTGTTACACTTCTAACAGTGCAGGTTTTGGAATTGCGTACAGGCAGCGACCCATGATCGAGCAACAACCAGGAATAGGGAAGCTAGCAACAGCTGGAAATTTTCACAAAACAACGCTATCTTCACTGGGTAGCGTAGGTAGATTTCCCATGGAGCATACATGGTTCACTTCCCAAATTGAAGATCAAATGGGCGGGTATGGCGATGTTAGAACTCAGCTGAAGGCCAATCAGGAAGAGATGAAGCCGCTTGATCTGTCACTCCGGCTTTGA | 816 | 0.4559 | MENLGKEGTLPDKPSILACIVAPPCVNAPLQNPAEKKQKLVEEDEEEKEQQKEEKQVSLLDLNISCDVGTRSCDLNLNLSTTISSETPQASADEPRFFSCNYCHRKFYSSQALGGHQNAHKRERTLARRGQKLGAQMMASAAAFGLHPFLHGEGDSSLASLPLYGVCHRPLGIQAHSMIHKPCYTSNSAGFGIAYRQRPMIEQQPGIGKLATAGNFHKTTLSSLGSVGRFPMEHTWFTSQIEDQMGGYGDVRTQLKANQEEMKPLDLSLRL* | 272 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte17g01438 | 271 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 98 | 125 | IPR013087 | - | |
Pte17g01438 | 271 | MobiDBLite | consensus disorder prediction | 36 | 54 | - | - | |
Pte17g01438 | 271 | Coils | Coil | 34 | 61 | - | - | |
Pte17g01438 | 271 | SUPERFAMILY | beta-beta-alpha zinc fingers | 95 | 125 | IPR036236 | - | |
Pte17g01438 | 271 | MobiDBLite | consensus disorder prediction | 28 | 54 | - | - | |
Pte17g01438 | 271 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 100 | 120 | IPR013087 | - | |
Pte17g01438 | 271 | Gene3D | Classic Zinc Finger | 71 | 144 | - | - | |
Pte17g01438 | 271 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 31 | 271 | IPR044246 | GO:0009788 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte17g01438 | Pte-Chr17 | 28916941 | 28918361 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte17g01438 | 41 | 272 | C2H2 Transcription Factor Family | AT5G10970 | 40.000 | 1.34e-36 | 129 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pte17g01438 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte17g01438 | - | - | qsu:112003164 | 217.624 |