Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01431 ATGGCTAAGTGTGAAAGTAACAACATGGGTTCTTTGGCTCTCGGCCAGCACGATCCCACCAGGACTACTACCACCTCCGGGGGCCATTTCCGGCTATGGTCCTCGTTCTCCGCCTCATCTCTTCGTCGGAAAATATTTGAAGCCGTCAGCTGTGGTGGCAGTTCTCAATATTACAATGATGAATTTGGTTCCGATCCGAATCCTACGGCAACAGAGGTGCCAGTGATGGAGAAATCAGCATTAAACGAGAAACAGAGGCAGCAGCAGACAGAGATGACGGAGGTGGAGGAGACGCGGAAGGCTGCAGCTTTGAGCTGGAAGTCAGAGTCGAAATTGAGAAATGAGAATGGGAATGCCAGGTCGGAGAAACTAGTGGATCTTCTAAATTTGGCGGAGGCTGAAATCAAGGGTGAGACTATGAAGAAGGCAGAAGCATTGGACGAACTCAAGCGTGTCGTGAAAGAGTTGCAGGTGGATGATTTGGAAAAGGCAAGAATGGCAGCAAGCAAAGTGAGGCTAATGGTGAAAGAAGATTCAGAAGTGAGAAGAACACTCGCAATGCTTGGAGCCATCCCACCTCTGGTCGGGATGCTGGATTTGGAAGATGTCGATTCTCAGATAGCTTCTCTCTATGCATTGCTCAATCTTGGGATCGGAAATGATCCGAACAAGGCTGCCATTGTCAAAGCAGGGGTCATTCACAAGATGTTAAAGATCATCGAAGCTCCAACTGCGCCAAACTCATCAGTTTCTGAAGCAGTCGTTGCCAATTTCCTCGGATTGAGTGCATTGGATTCTAATAAAGCCATTATTGGATCCTCAGGAGCAATGCCCTTCTTGGTTAAAATTTTCCAAAAAAACATAGACTCTAAATGTAGCTTGCAAGCCACCCAAGATGCACTCAGAGCACTGTACAATCTTTCAATCTTTCCTGCTAACATTTCATTCATGTTGGAATCTAATTTGGTTCCCTTTATGTTGAATACCATTGGGAACATGGAAGTTAGTGAAAGAATCCTTGCAATATTGAGTAATTTAGTATCAACTCCAGAGGGTCGTAAAGCAATCAGCGTAGTGCCAGATGCATTTCCAATTCTTGTTGACGTATTGAATTGGACAGACTCGCCAGGGTGCCAAGAAAAGGCTTCATATGTTCTGATGGTTATGGCACACAAATCTTATGGTGATAGACAGGCCATGATAGAGGCAGGTATTGCTTCTTCATTGCTTGAGTTAACACTTCTGGGAAGTTCTTTAGCGCAGAAGAGGGCGTCCAGGCTCTTGGAATATTTGAGAGTAGATAAAGGGAAACAGGTATCACAAAATTACAGTATCAACTTGATTGGAAATGTATCTGCTCCTAACAGTGGCTCTGCATCCTCATCAGCAAATCCGATTGAGCAAGTAAATGAGTCTAATGAAGAAGAAGATATGTTGAGCTCGGAAAGGAAAGCAGTTAAGCATTTAGTCCAGCAGAGCTTGCAAAATAACATGAGGAGAATTGTCAAAAGGGCGAATTTGCCTCAAGATTTTGTTCCATCAGATCACCTGAAATCACTCACTTCCAGTTCGACTTCAAAGAGCTTGCCATTCTGA 1596 0.4442 MAKCESNNMGSLALGQHDPTRTTTTSGGHFRLWSSFSASSLRRKIFEAVSCGGSSQYYNDEFGSDPNPTATEVPVMEKSALNEKQRQQQTEMTEVEETRKAAALSWKSESKLRNENGNARSEKLVDLLNLAEAEIKGETMKKAEALDELKRVVKELQVDDLEKARMAASKVRLMVKEDSEVRRTLAMLGAIPPLVGMLDLEDVDSQIASLYALLNLGIGNDPNKAAIVKAGVIHKMLKIIEAPTAPNSSVSEAVVANFLGLSALDSNKAIIGSSGAMPFLVKIFQKNIDSKCSLQATQDALRALYNLSIFPANISFMLESNLVPFMLNTIGNMEVSERILAILSNLVSTPEGRKAISVVPDAFPILVDVLNWTDSPGCQEKASYVLMVMAHKSYGDRQAMIEAGIASSLLELTLLGSSLAQKRASRLLEYLRVDKGKQVSQNYSINLIGNVSAPNSGSASSSANPIEQVNESNEEEDMLSSERKAVKHLVQQSLQNNMRRIVKRANLPQDFVPSDHLKSLTSSSTSKSLPF* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01431 531 MobiDBLite consensus disorder prediction 512 531 - -
Pte17g01431 531 MobiDBLite consensus disorder prediction 9 28 - -
Pte17g01431 531 SUPERFAMILY ARM repeat 148 438 IPR016024 -
Pte17g01431 531 Coils Coil 128 148 - -
Pte17g01431 531 Gene3D - 294 439 IPR011989 -
Pte17g01431 531 Gene3D - 131 293 IPR011989 -
Pte17g01431 531 MobiDBLite consensus disorder prediction 454 469 - -
Pte17g01431 531 MobiDBLite consensus disorder prediction 80 100 - -
Pte17g01431 531 MobiDBLite consensus disorder prediction 515 531 - -
Pte17g01431 531 MobiDBLite consensus disorder prediction 454 478 - -
Pte17g01431 531 SMART arm_5 220 263 IPR000225 GO:0005515
Pte17g01431 531 SMART arm_5 310 348 IPR000225 GO:0005515
Pte17g01431 531 SMART arm_5 178 218 IPR000225 GO:0005515
Pte17g01431 531 SMART arm_5 392 433 IPR000225 GO:0005515
Pte17g01431 531 SMART arm_5 264 309 IPR000225 GO:0005515
Pte17g01431 531 Coils Coil 78 98 - -
Pte17g01431 531 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 23 531 - -
Pte17g01431 531 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01431 Pte-Chr17 28858538 28860889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01431 159 438 U-box Gene Family AT1G67530 31.359 1.01e-31 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01431 - - mesc:110603056 622.083