Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01426 ACTCTGTTTGGCAAATATGAGAAGGGCAGACTTTTGGGAAAAGGGACGTTTGCCAGTGTCTACTACGGCAAACATGTTGTCACCGGCGAGAGTGTCGCCATCAAAGTCGTAAGCAAAGACCAAGTAAATAAAGAAGGCATGATGGAGCAGATCAAGCGGGAGATATCAGTCATGCGCTTGGTTCGACACCCTAACATAGTCGAGCTAAAAGAAGTCATGGCTACCAAGACCAAAATTTTCTTCATCATGGAGTTTGTTCGTGGCGGCGAACTCTTCTCGAAGATTGCAAAAGGCAAACTCAAAGAAGATCTCGCTCGTAAATACTTCCAACAGTTAATCAGTGCTGTGGATTTTTGTCACAGTAGAGGCGTGTCCCATAGGGATCTCAAGCCTGAAAATTTACTCCTCGATGAGAATGAAGACCTCAAAGTCTCTGATTTTGGTTTCTCCGCTTTGCCTGAACAACTGCGAAGTGATGGGCTTCTTCATACCCAGTGTGGAACTCCAGCTTATGTGGCCCCTGAAGTGTTGAGGAAAAGAGGGTACGATGGGTCTAAGGCTGATATTTGGTCTTGTGGCGTGATTCTTTATGCGCTGCTTGCTGGGTTTCTTCCTTTTCAAGATGTAAACCTCATGACTATGTACAGAAAGCTTTTGAAAGGTGATTACGAATTTCCGCCTTGGTTTTCAAACGAATCGAGGAGACTGATCTCTAAGCTACTTGTGGTTGATCCAGAAAGACGGATTTGTATTCCTGCAATAATGCGTGTTCCTTGGTTTCGGAAGGAGTTCAAAACACCAATCGCCTTTTCTGTCGAAGAAGCTCCCATTTCAGACGAAGCTGATCATGATGAAGCAGAACTGCCGTTGGTTGACTCAGAATTGAATAAGTCTCCAAATCGAAAGGGGCCCAAGATTTTAAACGCCTTCGAGTTTATTTCTTCTATGTCTTCTGGATTCGATTTGTCTAATTTATTCGAGAACAAGACGAAAGCTGGGTCCATGTTCACTTCCATGTGTCCGGCCACCACAATCCTGTCAAAAATCGAGACGGTGGCAAAGTGTTTAGGTTTCAGAGTAGCGAGTGCTAAGGACTTCAAGATTAGATTACAGGGGCCAGCGGGAGGTAGGAAGGGGAGACTTTCGGTCACGGCGGAGGTGTTCGAGGTTGCGCCGGAAATCGCCGTCGTTGAATTCTGCAAATCCTCTGGCGACACTCTCGAATATGCCAAATTTTGCTCAGATGGCGTCAGGCCAGCTTTGAAAGACATAGTTTGGACATGGCAG 1287 0.4577 TLFGKYEKGRLLGKGTFASVYYGKHVVTGESVAIKVVSKDQVNKEGMMEQIKREISVMRLVRHPNIVELKEVMATKTKIFFIMEFVRGGELFSKIAKGKLKEDLARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENEDLKVSDFGFSALPEQLRSDGLLHTQCGTPAYVAPEVLRKRGYDGSKADIWSCGVILYALLAGFLPFQDVNLMTMYRKLLKGDYEFPPWFSNESRRLISKLLVVDPERRICIPAIMRVPWFRKEFKTPIAFSVEEAPISDEADHDEAELPLVDSELNKSPNRKGPKILNAFEFISSMSSGFDLSNLFENKTKAGSMFTSMCPATTILSKIETVAKCLGFRVASAKDFKIRLQGPAGGRKGRLSVTAEVFEVAPEIAVVEFCKSSGDTLEYAKFCSDGVRPALKDIVWTWQ 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01426 429 CDD CIPK_C 308 422 - -
Pte17g01426 429 FunFam Non-specific serine/threonine protein kinase 1 299 - -
Pte17g01426 429 FunFam Non-specific serine/threonine protein kinase 302 426 - -
Pte17g01426 429 FunFam Non-specific serine/threonine protein kinase 1 85 - -
Pte17g01426 429 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Pte17g01426 429 SMART serkin_6 6 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01426 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pte17g01426 429 Gene3D Kinase associated domain 1, KA1 304 427 - -
Pte17g01426 429 Pfam Protein kinase domain 6 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01426 429 SUPERFAMILY Protein kinase-like (PK-like) 3 319 IPR011009 -
Pte17g01426 429 CDD STKc_SnRK3 5 259 - -
Pte17g01426 429 ProSiteProfiles NAF domain profile. 302 327 IPR018451 GO:0007165
Pte17g01426 429 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 2 422 - -
Pte17g01426 429 ProSiteProfiles Protein kinase domain profile. 6 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01426 429 Gene3D Transferase(Phosphotransferase) domain 1 1 303 - -
Pte17g01426 429 Pfam NAF domain 304 361 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01426 Pte-Chr17 28817945 28819231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01426 1 429 CBL-interacting serine-threonine protein kinases AT5G10930 71.628 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte17g01426 Pkinase 5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01426 - - qsa:O6P43_015759 674.855