Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01421 ATGGCTGCCTCAACTTTGCGAGCTTTTTCCCTTTACGTAGTCTTCCTCCTCTTCATCATCTCAGAGGCTAAGGATTTCAATGTCGGAAACACGATTAAAGGATGGCAGATACCAGGAGGCGATGAAACTGATTTGAATGATTGGGCTAAGGCTAATCGTTTTCAAATTGGGGATGCTCTTGTGTTTCCAGTGAACGGTGGGAACTCCGCCTTGGAGGTGAACCAAATAGATTATACAAATTGCACCACAGCAAACCCCATAGAAACATACGAAGGTGCGAACAACAAGTCATTGCTTTACCGCAGTGGAGATTTTTTCTTCGTAAGTGGACAGAAGGACAATTGCAACAAGGGTCAAAAGCTTCAGGTTAGGGTTCTGGCTCGCAGAGACCAAACCCCTGGTGGTACCATCCCTTCTTCAGGGAAAACTTCCACGCTTCCAGCACCGACAGGACCAGCGGGCACTCTTCCTTCTCCAGGACAAGCGGCCACTCTTCCTACTCCTGCAGGACAAGCCGGTACTCTCCAATCTGGTTCAAGTCTGGCTTCCACTGGAACTGCCATGCAGTTTGGTTTTCTACTGTTCACACTGGGGATGTTGGCCATCAGGTTATTCTGA 618 0.4838 MAASTLRAFSLYVVFLLFIISEAKDFNVGNTIKGWQIPGGDETDLNDWAKANRFQIGDALVFPVNGGNSALEVNQIDYTNCTTANPIETYEGANNKSLLYRSGDFFFVSGQKDNCNKGQKLQVRVLARRDQTPGGTIPSSGKTSTLPAPTGPAGTLPSPGQAATLPTPAGQAGTLQSGSSLASTGTAMQFGFLLFTLGMLAIRLF* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01421 205 PANTHER BLUE COPPER PROTEIN 25 152 IPR039391 GO:0009055
Pte17g01421 205 MobiDBLite consensus disorder prediction 133 151 - -
Pte17g01421 205 FunFam Cupredoxin superfamily protein 23 131 - -
Pte17g01421 205 Pfam Plastocyanin-like domain 42 119 IPR003245 GO:0009055
Pte17g01421 205 Gene3D - 23 136 IPR008972 -
Pte17g01421 205 ProSiteProfiles Phytocyanin domain profile. 24 127 IPR003245 GO:0009055
Pte17g01421 205 SUPERFAMILY Cupredoxins 23 126 IPR008972 -
Pte17g01421 205 MobiDBLite consensus disorder prediction 128 178 - -
Pte17g01421 205 MobiDBLite consensus disorder prediction 160 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01421 Pte-Chr17 28781658 28782382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01421 1 129 Phytocyanin Superfamily AT5G25090 39.231 1.33e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01421 - - ahf:112782998 125.176