Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01420 ATGGGTGTATATCTCAGCACTCCAAAAACTGAGAAATTTTCTGAGGATGGCGAGAACAATCGGCTTAAGTATGGATTATCATCAATGCAAGGCTGGCGCTCAACAATGGAAGATGCTCATGCTGCATTTACTGATCTGGACGGGTGCACATCATTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCCAAATTTCTTCACCTACAGGTGCTTACCAGCGAAGCCTATGCAGCTGGTGACATTGAAACCGCACTTCAGAAAGCATTTTTCAGAATGGATGAGATGATGCGTGGACAAAGAGGATGGCGAGAATTAGCTCTTTTAGGAGATAAAGTAAACAAGTTCCCTGGAATGATAGAAGGGTTAATTTGGTCTCCTAAAAGTAATGATGGTAATAATCCAGTGGATAATTGTGCTTTTGAGGAGGGCCCCCATTCTGATTTTGCGGGACCAACTTCAGGTAGCACAGCTTGTGTTGCAATTATCAGAAACAACCAGCTTTTTGTTGCAAATGCTGGTGATTCACGTTGTGTGATTTCTAGGAAGGGTCAGGCGTATAATTTGTCTAGGGATCACAAACCAGATCTTGAGTCTGAGAGGGAAAGGATTTTGAAAGCCGGTGGCTTCATTCATTCCGGAAGGGTCAACGGCAGTTTAAATCTTGCTAGAGCTATAGGTAGTGATATGGAGTTTAAACAGAATAAGTTTTTACCTGCTGAGAGACAAATTGTGACTGCCAAGCCAGACATTAACACGGTTGAGCTTTGCGAAGATGATGAATTCATGGTGCTGGCTTGCGATGGTATCTGGGATTGCATGTCCAGCCAGCAACTTGTAGACACTGTACATGAACAACTACAATCTGAAATAAAACAATCACTAGTGTGTGAAAGAGTACTGGATCGGTGCTTAGCACCCTCAACGATTGGCGGTGAGGGTTTTGATAATATGACAATGATCCTGGTTCAGTTCAAGAAGCCTATGGTGTCAACTGTACCAGCAGACGAGCACGAGCAAGTCTCTTCAGACAAAGCAACTTCTACTGATACGGAACAAGAAGAGGGTTAA 1086 0.4319 MGVYLSTPKTEKFSEDGENNRLKYGLSSMQGWRSTMEDAHAAFTDLDGCTSFFGVYDGHGGKVVAKFCAKFLHLQVLTSEAYAAGDIETALQKAFFRMDEMMRGQRGWRELALLGDKVNKFPGMIEGLIWSPKSNDGNNPVDNCAFEEGPHSDFAGPTSGSTACVAIIRNNQLFVANAGDSRCVISRKGQAYNLSRDHKPDLESERERILKAGGFIHSGRVNGSLNLARAIGSDMEFKQNKFLPAERQIVTAKPDINTVELCEDDEFMVLACDGIWDCMSSQQLVDTVHEQLQSEIKQSLVCERVLDRCLAPSTIGGEGFDNMTMILVQFKKPMVSTVPADEHEQVSSDKATSTDTEQEEG* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01420 361 SMART PP2C_SIG_2 28 330 IPR001932 -
Pte17g01420 361 MobiDBLite consensus disorder prediction 338 361 - -
Pte17g01420 361 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Pte17g01420 361 CDD PP2Cc 23 330 IPR001932 -
Pte17g01420 361 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Pte17g01420 361 Gene3D - 1 331 IPR036457 -
Pte17g01420 361 ProSiteProfiles PPM-type phosphatase domain profile. 23 330 IPR001932 -
Pte17g01420 361 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Pte17g01420 361 Pfam Protein phosphatase 2C 157 314 IPR001932 -
Pte17g01420 361 PANTHER PROTEIN PHOSPHATASE 2C 13 329 IPR015655 GO:0004722|GO:0006470
Pte17g01420 361 SMART PP2C_4 13 328 IPR001932 -
Pte17g01420 361 MobiDBLite consensus disorder prediction 343 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01420 Pte-Chr17 28773484 28777279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01420 1 341 PP2C-type Phosphatase Gene Family AT2G25070 75.731 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01420 K17499 - cpap:110808248 598.201