Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01410 ATGTTTGATGATTTTGATAGGTTCATGAAAGTCCCTGATAAATGGGCTCCTCCTGAAATCAAGCCATATGTCCCAGTGGAAAACTTGCAACATTGGTTGACTGATCCTAAAGCTCGTGACCAATTTGTAATTCGTGCTGCTTCAGATACGGAAGTTTTGTGGAATGATGCCAGGCAAATGAAGCCTGACCCGGTTTACAAGCGACCTTTTTGGACGGAAAGTTTTGTGCAATGGTCGCCATTGGGCACATACTTGGCAACAGTTCATAGACAGGGAGCTGCAGTGTGGGGTGGTGCTACAGAGTTTAATCGCCTCATGCGATTTGCTCATCCTCAGGTTAAACTTATTGATTTCTCACCTGGTGAGAAGTACCTTGTGACCTATAGCAGCCATGAACCAAACAATCCCCGAGATGCAAATATGGTTAGGATAAGCATATTTGACATAAGAACTGGAAAAGTCATGCGTGATTTCAAGGGAAGTGCGGATGAGTATGCAATCGGAGGCACTGGTGGTGTCACTGCGTCATGGCCGATTTTCAGATGGGGAGGTGGAAAAGACGATAAGTATTTTGCAAGAATTGGGAAAAATGTGATATTTGTATATGAGACTGAGACTTTCGCTCTTGTTGACAAGAAATCCTTGAAGGTTGAAAATGTAGTTGATTTCAGTTGGTCTCCGACTGATCCAATTCTAGCTCTTTTTGTTCCTGAATTAGGTGGGGGAAATCAGCCTGCTAAGGTAAGTTTGGTTCAAATTCCCAGTAAAGAGGAAATCCGACAAAAAAACCTTTTCAGTGTCAGTGACTGCAAGATGTACTGGCAAAGCAATGGAGACTACCTTGCCGTCAAGGTTGATCGCTACACAAAAACCAAGAAAAGCACATATACAGGTTTTGAGCTATTCCGCATTAAAGAGCGGGACATACCCATTGAGGTTTTGGAGCTGGATAATAAGAATGACAAAATCATTGCCTTCGCTTGGGAGCCAAAGGGCCATCGTTTTGCAGTTATTCATGGAGATAACCCAAGGCCTGATATCAGTTTCTTTTCAATGCGAACTGCCACGAATACAAACCGGGTATCTAAACTTACAACTCTAAAAGGAAAGCAGGCGAATGCCCTTTTTTGGTCACCTGCTGGCCGCTTCATAATACTTGCCGGGCTCAAGGGGTTAAATGGGCAGCTGGAATTTTACAATGTTGATGACCTCGAAACCATGGCAACAGCTGAGCATTTTATGGCAACAGATATTGAATGGGATCCTACTGGAAGGTATGTTGCGACTTCTGTCACTTCAGTTCATGAAATGGAAAATGGATTCAATATTTGGTCATTCAATGGAAAGCTTCTTTACCGTATACTGAAAGATCATTTCTTCCAGTTCCTGTGGCGTCCCAGGCCACCTTCTTTCTTGAGTCCTGAAAAGGAGGAAGAGATTGCCAAGAATTTGAAGAAGTACAGCAAGAAGTATGAGGCCGAAGATCAAGATGTATCGTTGCTGTTGAGTGAACAGGAACGTGAGAAGCGGAGGATGTTGAAGGAGGAATGGGAGAAGTGGGTGGATGAGTGGAAAAGGTTGCACGATGAAGAAAAGTTAGAGAGGCAAAAGCTCAGAGATGGGGAATCCAGTGACGAGGAAGAGGAGTACGAGGCGAAGGACATAGAAGTTGAGGAGGTGTTGGATGTTTCCGAGGAAGTTGTTTCCTTTGATTACGAGTAA 1722 0.4379 MFDDFDRFMKVPDKWAPPEIKPYVPVENLQHWLTDPKARDQFVIRAASDTEVLWNDARQMKPDPVYKRPFWTESFVQWSPLGTYLATVHRQGAAVWGGATEFNRLMRFAHPQVKLIDFSPGEKYLVTYSSHEPNNPRDANMVRISIFDIRTGKVMRDFKGSADEYAIGGTGGVTASWPIFRWGGGKDDKYFARIGKNVIFVYETETFALVDKKSLKVENVVDFSWSPTDPILALFVPELGGGNQPAKVSLVQIPSKEEIRQKNLFSVSDCKMYWQSNGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDNPRPDISFFSMRTATNTNRVSKLTTLKGKQANALFWSPAGRFIILAGLKGLNGQLEFYNVDDLETMATAEHFMATDIEWDPTGRYVATSVTSVHEMENGFNIWSFNGKLLYRILKDHFFQFLWRPRPPSFLSPEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQEREKRRMLKEEWEKWVDEWKRLHDEEKLERQKLRDGESSDEEEEYEAKDIEVEEVLDVSEEVVSFDYE* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01410 573 Gene3D - 35 237 IPR015943 GO:0005515
Pte17g01410 573 Pfam Eukaryotic translation initiation factor eIF2A 262 462 IPR013979 -
Pte17g01410 573 SUPERFAMILY DPP6 N-terminal domain-like 74 459 - -
Pte17g01410 573 Hamap Eukaryotic translation initiation factor 3 subunit B [EIF3B]. 2 569 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Pte17g01410 573 Gene3D - 260 481 IPR015943 GO:0005515
Pte17g01410 573 MobiDBLite consensus disorder prediction 535 554 - -
Pte17g01410 573 FunFam Eukaryotic translation initiation factor 3 subunit B 38 238 - -
Pte17g01410 573 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 1 567 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Pte17g01410 573 FunFam Eukaryotic translation initiation factor 3 subunit B 267 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01410 Pte-Chr17 28720288 28723595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01410 1 568 Eukaryotic Initiation Factors Gene Family AT5G27640 79.649 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01410 K03253 - qsa:O6P43_015800 1047.34