Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01409 ATGGTAGCTGGCATTAATTGGCGTGCAAAAATAAGCTATTGGAACACAGTTTTGCTGTCTCTTCTTCATTTTCGCATATTGGTCGAAGCAATCACACTCGGGCCGTCTGGGCATCCATACTTTAATATGGGGTATCTTAATTCAGTTCTATCATCTTCAACCCAAATTCATTCTGCTGAAGATTCGCCCGTGAGCGGCGGAGGCCTCAGTCAGAATGGCAAGTTCAGCTACGGATATGCTAGTTCTCCTGGAAAAAGGTCTTCAATGGAAGATTTTTATGAGACCAGGATCGATGGTATTGATGGCGAGATAGTTGGCCTGTTTGGAGTATTCGATGGTCATGGTGGTGCCCGAGCTGCAGAGTATGTCAAGCAAAACCTTTTCAGTAATTTGATCAGTCATCCCAAATTTATCTCTGATACAAAATCAGCTATAGCTGATGCATACAGCCATACAGACTCTGAGTTTCTGAAATCGGAGAATACTCAAAACAGAGATGCTGGTTCCACCGCTTCAACTGCTATTCTAGTCGGTGACCGTTTACTTGTTGCAAATGTTGGGGATTCTCGAGCTGTTATATGCAGGGGCGGTAATGCCATTGCTGTTTCTCGAGATCACAAGCCTGACCAAACTGATGAGCGGCAACGGATTGAAGATGCTGGAGGTTTTGTCATGTGGGCAGGAACATGGAGAGTTGGCGGAGTTCTTGCTGTTTCCCGTGCATTTGGTGATAGGCTGCTAAAGCAGTATGTTGTTGCTGATCCAGAAATACAGGAAGTAAAAATTGATAGCTCCCTTGAGTTTCTCATTCTAGCTAGTGATGGACTGTGGGATGTCGTCACAAACGAGGAAGCCGTTACTATGATTAAACCAATCCCAGACGCAGAGGAAGGAGCCAAGAGATTGCTTCAGGAAGCATATCAGAGAGGTAGTTCTGATAATATTACTTGTGTTGTCGTCCGTTTTTTGGCCAATCAAGGTGCTACCTCTCGTAGTGTTTCTGGACATAGGGAATCCCCCTCCATGTAG 1029 0.45 MVAGINWRAKISYWNTVLLSLLHFRILVEAITLGPSGHPYFNMGYLNSVLSSSTQIHSAEDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGIDGEIVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYSHTDSEFLKSENTQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEVKIDSSLEFLILASDGLWDVVTNEEAVTMIKPIPDAEEGAKRLLQEAYQRGSSDNITCVVVRFLANQGATSRSVSGHRESPSM* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01409 342 ProSitePatterns PPM-type phosphatase domain signature. 107 115 IPR000222 GO:0043169
Pte17g01409 342 Gene3D - 68 329 IPR036457 -
Pte17g01409 342 Pfam Protein phosphatase 2C 105 315 IPR001932 -
Pte17g01409 342 FunFam probable protein phosphatase 2C 59 68 326 - -
Pte17g01409 342 SUPERFAMILY PP2C-like 70 322 IPR036457 -
Pte17g01409 342 CDD PP2Cc 75 322 IPR001932 -
Pte17g01409 342 SMART PP2C_SIG_2 87 322 IPR001932 -
Pte17g01409 342 SMART PP2C_4 66 320 IPR001932 -
Pte17g01409 342 ProSiteProfiles PPM-type phosphatase domain profile. 76 322 IPR001932 -
Pte17g01409 342 PANTHER PROTEIN PHOSPHATASE 65 321 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01409 Pte-Chr17 28709121 28717420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01409 43 326 PP2C-type Phosphatase Gene Family AT4G31750 90.493 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01409 K17506 - qsa:O6P43_015804 578.941