Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01392 ATGGGGTCAACACCTTCGCCAATCTTCCAACTGTATGGTGATAACATGGTGAAACTTGAAGGGCCGGAAAATGATGCACATGACATTCTACTGGGGCAAAAGGTGACTCTTTTGATCGATTCCTGGCGCACGGATTCATGGACAGGTTACTTGTTGACTTTACTGGCATGCCTCGTTCTCGGTATTTATCCAGTACCTGGAGAACCTTGTCCCCTCAGTCTAGTCTTCTCCGCTACGCCAATCCCTCCGGGGAGACAGATCCAGACTCCTCTGCTTCAGCGGAAGCTAGCCGGAGTAAATGCTAAATTGGGAACTAAATCCGCCAAAGCGATTATGTTTGGTTTTAACTATGCGATCGGGTACCTTCTCATGTTGGCTGTCATGTCCTTTAATGGTGGGGTCTTTTTGGCCATTGTGCTGGGTCTTGCGATTGGGTACTAA 441 0.483 MGSTPSPIFQLYGDNMVKLEGPENDAHDILLGQKVTLLIDSWRTDSWTGYLLTLLACLVLGIYPVPGEPCPLSLVFSATPIPPGRQIQTPLLQRKLAGVNAKLGTKSAKAIMFGFNYAIGYLLMLAVMSFNGGVFLAIVLGLAIGY* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01392 146 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 32 146 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pte17g01392 146 Pfam Ctr copper transporter family 103 146 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01392 Pte-Chr17 28578434 28579853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01392 32 146 Inorganic Solute Cotransporters AT5G20650 45.455 2.06e-25 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01392 K14686 - qsa:O6P43_019154 135.191