Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01388 ATGGCATTTCGGTTTCAATTTGTTTTCCTGGCTTTTCTCCTATACCCGAACTTCAGTTTGGAGGATTCACATGATGGAGAGACACTACTGGAGATAAAGAAGTCATTTAGGGATGTCAACAACGTTTTATATGATTGGACAGACACATCTTCAGACTATTGTATATGGAGAGGGGTCACTTGTGACAATGCCACATTCAATGTCATTGCTCTTAACCTTTCAGGTCTTAATCTTGATGGCGAAATATCACCGGCTATAGGAGGTCTTAAGGGCCTGCTTTCTATTGATCTAAGAGGAAATCGCCTGTCTGGGCAGATACCAGATGAGATTGGCGACTGTTCTTCTTTGACAAACTTGGACATGTCCTTCAATTTCTTACAAGGAGATATACCATTTTCAATTTCGAAGTTGAAACAATTGGAATATTTGATTTTGAAGAATAACCAACTGGTTGGACCAATTCCTTCAACATTGACACAAATTCCCAACTTAAAGATTCTAGACCTGGCTCAAAATAATCTCACCGGTGAAATTCCAAGACTAATATACTGGAATGAAGTTTTGCAATATCTTGGCTTGCGAGGGAACAATTTGGTGGGCACAATATCACCGGATATATGTCAGCTTACTGGATTGTGGTACTTTGATGTAAGAAACAACAGTTTGACTGGCAGCATCCCTGTAAACGTTGGCAACTGCACAGCCTTCCAGGTTTTGGACCTATCCTACAACCAGCTCACAGGAGAAATACCATTTAATATTGGGTTTTTGCAAGTTGCTACACTATCTTTGCAAGGAAACAAACTCTCCGGTAGGATACCATCAGTGATTGGTCTGATGCAAGCACTTGCTGTTCTGGATTTGAGTTGTAACATGCTGAGTGGACCAATACCACCTATTCTTGGGAATTTGACATATACCGAGAAATTGTATTTGCATGGAAACAAGCTTACTGGATCGATTCCGCCTGAGCTAGGGAATATGACCAAGCTTCATTATCTAGAATTGAATGATAACTTTCTAACTGGACATATTCCTCCTGAGCTAGGGAGACTCACGGACTTGTTTGACCTGAATATTGCTAATAACAATCTTGAGGGACCGATTCCTGATAATATTGGCTCGTGCACAAATCTTAATAGCCTAAATGTACATGGGAACAAGTTGAATGGGACCATACCTCCCACTCTTCAGAAGCTCGAGAGTATGACCTATCTGAATCTCTCCAATAATAATCTTCAAGGACCAATTCCAATTGAGTTGTCACGGATTGGTAACCTGGATACACTGGATGTTTCACGTAACAATTTGAGTGGCTCAATACCTTCTTCTCTTGGAGACTTGGAACATCTTCTAAAGCTAAATCTGAGCAGAAACCACTTAACTGGGTTTATTCCAGCGGAGTTTGGTAATCTGAGAAGTGTTATGGAAATAGATCTTTCAATCAACCAACTCTCAGGATCCATTCCTCAAGAACTTGCTCAGCTTCAAAACATGTTCTCCTTGAAGCTTGAATACAACAATTTGTCTGGGGATGTGATGTCTCTTTTGACTTGCTTCAGCCTTAACATGCTCAACGTATCCTATAATAATTTGGCTGGTGATATACCCGTAAGCAATAACTTCTCAAGGTTTTCTCCTGACAGTTTTATTGGAAATCCTCATCTTTGTGGAAATTGGCTCAATTCTCCATGTCATGAATCTCATCCAACGGAGAGAGTCATTATGTCCAAGGCGACTATTTTAGGGATTGCTCTAGGTGCCCTCGTGATTCTTCTTATGGTTTTAGTGGCTGCTTGCCGTTCGCACGGTCAATCCCCCTTTCAAGAGGGATCCTTTGATAAACCAGTTACTTATTCACCGCCGAAACTGGTGATTCTTCACATGAACATGGCATTGCATGTTTATGAAGATATAATGAGGATGACGGAAAACTTGAGTGAGAAGTATATAATTGGTTATGGTGCATCAAGCATAGTATACAAGTGTGTCCTGAAGAACTGCAGACCAGTGGCTATCAAGAGGCTTTACAACCATCATCCTCAATGCTTGAAAGAATTTGAAACTGAGCTCGAAACTCTTGGCAGCATCAAGCACCGGAATCTCGTGAGCCTTCAAGGCTATTCCCTTTCCCCATACGGAAACCTTCTCTTCTATGACTACATGGAAAATGGAAGTCTTTGGGATATTCTTCATGGACAAGCTTGCAAGAAGAAAAAACTTGACTGGGGGCATCGACTACATATAGCACTTGGAGCAGCTCAAGGGCTTGCCTACCTACACCATGACTGCAATCCTCGAATCATTCACAGGGATGTGAAGTCGTCTAACATTCTACTAGACAAGGAATTGGAGCCTCATCTCACCGATTTCGGCATAGCAAAGAGTTTATGCAACACGAAGTCTTACACCTCTACATATATAATGGGCACCATTGGCTACATAGACCCTGAGTATGCCAGAACATCCCGCCTCACTGAAAAGTCTGATGTTTATAGCTATGGCATTGTTCTCCTTGAGCTTCTGACTGGAAGGAAACCTGTTGACAACGAATCAAATCTTCATCATCTAATTCTATCCAAGACTGCTAACGATACTGTCATGGAAACTGTGGATCGTGAGATCACTTCCACATGTAAGGACCTTGGAGCAGTCAAAAAGTTATTTCAGCTTGCTCTTCTGTGCACCAAGAGACAGCCTTCAGATAGACCCACCATGCATGAGGTAACTCGTGTATTGGGAAGTCTTGTGCCTTCAACAGACCCTCCAAAACAGCTTGCTCCACTACCACCTGCCTCGAATCCATCTGCTAAGTTGGCTTGCTATGTGGATGAATATGCAAATCTCAAGACTCCACACATGGTAAACTGCCCATCCATGAGTACTTCAGATGGTCAACTTTTTCTCAAGTTTGGTGAGGTTATTGCTCAGAACAGTGAGTAA 2943 0.4186 MAFRFQFVFLAFLLYPNFSLEDSHDGETLLEIKKSFRDVNNVLYDWTDTSSDYCIWRGVTCDNATFNVIALNLSGLNLDGEISPAIGGLKGLLSIDLRGNRLSGQIPDEIGDCSSLTNLDMSFNFLQGDIPFSISKLKQLEYLILKNNQLVGPIPSTLTQIPNLKILDLAQNNLTGEIPRLIYWNEVLQYLGLRGNNLVGTISPDICQLTGLWYFDVRNNSLTGSIPVNVGNCTAFQVLDLSYNQLTGEIPFNIGFLQVATLSLQGNKLSGRIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLTYTEKLYLHGNKLTGSIPPELGNMTKLHYLELNDNFLTGHIPPELGRLTDLFDLNIANNNLEGPIPDNIGSCTNLNSLNVHGNKLNGTIPPTLQKLESMTYLNLSNNNLQGPIPIELSRIGNLDTLDVSRNNLSGSIPSSLGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMEIDLSINQLSGSIPQELAQLQNMFSLKLEYNNLSGDVMSLLTCFSLNMLNVSYNNLAGDIPVSNNFSRFSPDSFIGNPHLCGNWLNSPCHESHPTERVIMSKATILGIALGALVILLMVLVAACRSHGQSPFQEGSFDKPVTYSPPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSIVYKCVLKNCRPVAIKRLYNHHPQCLKEFETELETLGSIKHRNLVSLQGYSLSPYGNLLFYDYMENGSLWDILHGQACKKKKLDWGHRLHIALGAAQGLAYLHHDCNPRIIHRDVKSSNILLDKELEPHLTDFGIAKSLCNTKSYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKPVDNESNLHHLILSKTANDTVMETVDREITSTCKDLGAVKKLFQLALLCTKRQPSDRPTMHEVTRVLGSLVPSTDPPKQLAPLPPASNPSAKLACYVDEYANLKTPHMVNCPSMSTSDGQLFLKFGEVIAQNSE* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01388 980 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 160 914 - -
Pte17g01388 980 Gene3D Phosphorylase Kinase; domain 1 619 721 - -
Pte17g01388 980 SMART LRR_typ_2 328 352 IPR003591 -
Pte17g01388 980 SMART LRR_typ_2 89 113 IPR003591 -
Pte17g01388 980 SMART LRR_typ_2 209 233 IPR003591 -
Pte17g01388 980 SMART LRR_typ_2 161 185 IPR003591 -
Pte17g01388 980 SMART LRR_typ_2 472 496 IPR003591 -
Pte17g01388 980 SMART LRR_typ_2 448 471 IPR003591 -
Pte17g01388 980 SMART LRR_typ_2 400 424 IPR003591 -
Pte17g01388 980 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 722 924 - -
Pte17g01388 980 Gene3D Transferase(Phosphotransferase) domain 1 722 923 - -
Pte17g01388 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 768 780 IPR008271 GO:0004672|GO:0006468
Pte17g01388 980 SUPERFAMILY L domain-like 23 299 - -
Pte17g01388 980 Pfam Leucine rich repeat 426 485 IPR001611 GO:0005515
Pte17g01388 980 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Pte17g01388 980 Gene3D Ribonuclease Inhibitor 440 566 IPR032675 -
Pte17g01388 980 Gene3D Ribonuclease Inhibitor 345 439 IPR032675 -
Pte17g01388 980 Gene3D Ribonuclease Inhibitor 22 183 IPR032675 -
Pte17g01388 980 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 296 568 - -
Pte17g01388 980 Gene3D Ribonuclease Inhibitor 258 344 IPR032675 -
Pte17g01388 980 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 22 185 - -
Pte17g01388 980 Pfam Protein kinase domain 649 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01388 980 CDD STKc_IRAK 652 916 - -
Pte17g01388 980 Gene3D Ribonuclease Inhibitor 184 257 IPR032675 -
Pte17g01388 980 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 186 295 - -
Pte17g01388 980 SMART serkin_6 646 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01388 980 ProSitePatterns Protein kinases ATP-binding region signature. 652 674 IPR017441 GO:0005524
Pte17g01388 980 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 617 721 - -
Pte17g01388 980 SUPERFAMILY Protein kinase-like (PK-like) 624 913 IPR011009 -
Pte17g01388 980 ProSiteProfiles Leucine-rich repeat profile. 163 185 IPR001611 GO:0005515
Pte17g01388 980 ProSiteProfiles Protein kinase domain profile. 646 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01388 980 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Pte17g01388 980 SUPERFAMILY RNI-like 202 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01388 Pte-Chr17 28544539 28551424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01388 92 917 Receptor kinase-like Gene Family AT5G07180 68.803 0.0 1142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Pte17g01388 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01388 K20718 - rcu:8258591 1690.24