Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte17g01388 | ATGGCATTTCGGTTTCAATTTGTTTTCCTGGCTTTTCTCCTATACCCGAACTTCAGTTTGGAGGATTCACATGATGGAGAGACACTACTGGAGATAAAGAAGTCATTTAGGGATGTCAACAACGTTTTATATGATTGGACAGACACATCTTCAGACTATTGTATATGGAGAGGGGTCACTTGTGACAATGCCACATTCAATGTCATTGCTCTTAACCTTTCAGGTCTTAATCTTGATGGCGAAATATCACCGGCTATAGGAGGTCTTAAGGGCCTGCTTTCTATTGATCTAAGAGGAAATCGCCTGTCTGGGCAGATACCAGATGAGATTGGCGACTGTTCTTCTTTGACAAACTTGGACATGTCCTTCAATTTCTTACAAGGAGATATACCATTTTCAATTTCGAAGTTGAAACAATTGGAATATTTGATTTTGAAGAATAACCAACTGGTTGGACCAATTCCTTCAACATTGACACAAATTCCCAACTTAAAGATTCTAGACCTGGCTCAAAATAATCTCACCGGTGAAATTCCAAGACTAATATACTGGAATGAAGTTTTGCAATATCTTGGCTTGCGAGGGAACAATTTGGTGGGCACAATATCACCGGATATATGTCAGCTTACTGGATTGTGGTACTTTGATGTAAGAAACAACAGTTTGACTGGCAGCATCCCTGTAAACGTTGGCAACTGCACAGCCTTCCAGGTTTTGGACCTATCCTACAACCAGCTCACAGGAGAAATACCATTTAATATTGGGTTTTTGCAAGTTGCTACACTATCTTTGCAAGGAAACAAACTCTCCGGTAGGATACCATCAGTGATTGGTCTGATGCAAGCACTTGCTGTTCTGGATTTGAGTTGTAACATGCTGAGTGGACCAATACCACCTATTCTTGGGAATTTGACATATACCGAGAAATTGTATTTGCATGGAAACAAGCTTACTGGATCGATTCCGCCTGAGCTAGGGAATATGACCAAGCTTCATTATCTAGAATTGAATGATAACTTTCTAACTGGACATATTCCTCCTGAGCTAGGGAGACTCACGGACTTGTTTGACCTGAATATTGCTAATAACAATCTTGAGGGACCGATTCCTGATAATATTGGCTCGTGCACAAATCTTAATAGCCTAAATGTACATGGGAACAAGTTGAATGGGACCATACCTCCCACTCTTCAGAAGCTCGAGAGTATGACCTATCTGAATCTCTCCAATAATAATCTTCAAGGACCAATTCCAATTGAGTTGTCACGGATTGGTAACCTGGATACACTGGATGTTTCACGTAACAATTTGAGTGGCTCAATACCTTCTTCTCTTGGAGACTTGGAACATCTTCTAAAGCTAAATCTGAGCAGAAACCACTTAACTGGGTTTATTCCAGCGGAGTTTGGTAATCTGAGAAGTGTTATGGAAATAGATCTTTCAATCAACCAACTCTCAGGATCCATTCCTCAAGAACTTGCTCAGCTTCAAAACATGTTCTCCTTGAAGCTTGAATACAACAATTTGTCTGGGGATGTGATGTCTCTTTTGACTTGCTTCAGCCTTAACATGCTCAACGTATCCTATAATAATTTGGCTGGTGATATACCCGTAAGCAATAACTTCTCAAGGTTTTCTCCTGACAGTTTTATTGGAAATCCTCATCTTTGTGGAAATTGGCTCAATTCTCCATGTCATGAATCTCATCCAACGGAGAGAGTCATTATGTCCAAGGCGACTATTTTAGGGATTGCTCTAGGTGCCCTCGTGATTCTTCTTATGGTTTTAGTGGCTGCTTGCCGTTCGCACGGTCAATCCCCCTTTCAAGAGGGATCCTTTGATAAACCAGTTACTTATTCACCGCCGAAACTGGTGATTCTTCACATGAACATGGCATTGCATGTTTATGAAGATATAATGAGGATGACGGAAAACTTGAGTGAGAAGTATATAATTGGTTATGGTGCATCAAGCATAGTATACAAGTGTGTCCTGAAGAACTGCAGACCAGTGGCTATCAAGAGGCTTTACAACCATCATCCTCAATGCTTGAAAGAATTTGAAACTGAGCTCGAAACTCTTGGCAGCATCAAGCACCGGAATCTCGTGAGCCTTCAAGGCTATTCCCTTTCCCCATACGGAAACCTTCTCTTCTATGACTACATGGAAAATGGAAGTCTTTGGGATATTCTTCATGGACAAGCTTGCAAGAAGAAAAAACTTGACTGGGGGCATCGACTACATATAGCACTTGGAGCAGCTCAAGGGCTTGCCTACCTACACCATGACTGCAATCCTCGAATCATTCACAGGGATGTGAAGTCGTCTAACATTCTACTAGACAAGGAATTGGAGCCTCATCTCACCGATTTCGGCATAGCAAAGAGTTTATGCAACACGAAGTCTTACACCTCTACATATATAATGGGCACCATTGGCTACATAGACCCTGAGTATGCCAGAACATCCCGCCTCACTGAAAAGTCTGATGTTTATAGCTATGGCATTGTTCTCCTTGAGCTTCTGACTGGAAGGAAACCTGTTGACAACGAATCAAATCTTCATCATCTAATTCTATCCAAGACTGCTAACGATACTGTCATGGAAACTGTGGATCGTGAGATCACTTCCACATGTAAGGACCTTGGAGCAGTCAAAAAGTTATTTCAGCTTGCTCTTCTGTGCACCAAGAGACAGCCTTCAGATAGACCCACCATGCATGAGGTAACTCGTGTATTGGGAAGTCTTGTGCCTTCAACAGACCCTCCAAAACAGCTTGCTCCACTACCACCTGCCTCGAATCCATCTGCTAAGTTGGCTTGCTATGTGGATGAATATGCAAATCTCAAGACTCCACACATGGTAAACTGCCCATCCATGAGTACTTCAGATGGTCAACTTTTTCTCAAGTTTGGTGAGGTTATTGCTCAGAACAGTGAGTAA | 2943 | 0.4186 | MAFRFQFVFLAFLLYPNFSLEDSHDGETLLEIKKSFRDVNNVLYDWTDTSSDYCIWRGVTCDNATFNVIALNLSGLNLDGEISPAIGGLKGLLSIDLRGNRLSGQIPDEIGDCSSLTNLDMSFNFLQGDIPFSISKLKQLEYLILKNNQLVGPIPSTLTQIPNLKILDLAQNNLTGEIPRLIYWNEVLQYLGLRGNNLVGTISPDICQLTGLWYFDVRNNSLTGSIPVNVGNCTAFQVLDLSYNQLTGEIPFNIGFLQVATLSLQGNKLSGRIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLTYTEKLYLHGNKLTGSIPPELGNMTKLHYLELNDNFLTGHIPPELGRLTDLFDLNIANNNLEGPIPDNIGSCTNLNSLNVHGNKLNGTIPPTLQKLESMTYLNLSNNNLQGPIPIELSRIGNLDTLDVSRNNLSGSIPSSLGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMEIDLSINQLSGSIPQELAQLQNMFSLKLEYNNLSGDVMSLLTCFSLNMLNVSYNNLAGDIPVSNNFSRFSPDSFIGNPHLCGNWLNSPCHESHPTERVIMSKATILGIALGALVILLMVLVAACRSHGQSPFQEGSFDKPVTYSPPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSIVYKCVLKNCRPVAIKRLYNHHPQCLKEFETELETLGSIKHRNLVSLQGYSLSPYGNLLFYDYMENGSLWDILHGQACKKKKLDWGHRLHIALGAAQGLAYLHHDCNPRIIHRDVKSSNILLDKELEPHLTDFGIAKSLCNTKSYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKPVDNESNLHHLILSKTANDTVMETVDREITSTCKDLGAVKKLFQLALLCTKRQPSDRPTMHEVTRVLGSLVPSTDPPKQLAPLPPASNPSAKLACYVDEYANLKTPHMVNCPSMSTSDGQLFLKFGEVIAQNSE* | 981 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte17g01388 | 980 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 160 | 914 | - | - | |
Pte17g01388 | 980 | Gene3D | Phosphorylase Kinase; domain 1 | 619 | 721 | - | - | |
Pte17g01388 | 980 | SMART | LRR_typ_2 | 328 | 352 | IPR003591 | - | |
Pte17g01388 | 980 | SMART | LRR_typ_2 | 89 | 113 | IPR003591 | - | |
Pte17g01388 | 980 | SMART | LRR_typ_2 | 209 | 233 | IPR003591 | - | |
Pte17g01388 | 980 | SMART | LRR_typ_2 | 161 | 185 | IPR003591 | - | |
Pte17g01388 | 980 | SMART | LRR_typ_2 | 472 | 496 | IPR003591 | - | |
Pte17g01388 | 980 | SMART | LRR_typ_2 | 448 | 471 | IPR003591 | - | |
Pte17g01388 | 980 | SMART | LRR_typ_2 | 400 | 424 | IPR003591 | - | |
Pte17g01388 | 980 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 722 | 924 | - | - | |
Pte17g01388 | 980 | Gene3D | Transferase(Phosphotransferase) domain 1 | 722 | 923 | - | - | |
Pte17g01388 | 980 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 768 | 780 | IPR008271 | GO:0004672|GO:0006468 | |
Pte17g01388 | 980 | SUPERFAMILY | L domain-like | 23 | 299 | - | - | |
Pte17g01388 | 980 | Pfam | Leucine rich repeat | 426 | 485 | IPR001611 | GO:0005515 | |
Pte17g01388 | 980 | Pfam | Leucine rich repeat | 115 | 174 | IPR001611 | GO:0005515 | |
Pte17g01388 | 980 | Gene3D | Ribonuclease Inhibitor | 440 | 566 | IPR032675 | - | |
Pte17g01388 | 980 | Gene3D | Ribonuclease Inhibitor | 345 | 439 | IPR032675 | - | |
Pte17g01388 | 980 | Gene3D | Ribonuclease Inhibitor | 22 | 183 | IPR032675 | - | |
Pte17g01388 | 980 | FunFam | LRR receptor-like serine/threonine-protein kinase ERL1 | 296 | 568 | - | - | |
Pte17g01388 | 980 | Gene3D | Ribonuclease Inhibitor | 258 | 344 | IPR032675 | - | |
Pte17g01388 | 980 | FunFam | LRR receptor-like serine/threonine-protein kinase ERL1 | 22 | 185 | - | - | |
Pte17g01388 | 980 | Pfam | Protein kinase domain | 649 | 910 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte17g01388 | 980 | CDD | STKc_IRAK | 652 | 916 | - | - | |
Pte17g01388 | 980 | Gene3D | Ribonuclease Inhibitor | 184 | 257 | IPR032675 | - | |
Pte17g01388 | 980 | FunFam | LRR receptor-like serine/threonine-protein kinase ERL1 | 186 | 295 | - | - | |
Pte17g01388 | 980 | SMART | serkin_6 | 646 | 913 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte17g01388 | 980 | ProSitePatterns | Protein kinases ATP-binding region signature. | 652 | 674 | IPR017441 | GO:0005524 | |
Pte17g01388 | 980 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 617 | 721 | - | - | |
Pte17g01388 | 980 | SUPERFAMILY | Protein kinase-like (PK-like) | 624 | 913 | IPR011009 | - | |
Pte17g01388 | 980 | ProSiteProfiles | Leucine-rich repeat profile. | 163 | 185 | IPR001611 | GO:0005515 | |
Pte17g01388 | 980 | ProSiteProfiles | Protein kinase domain profile. | 646 | 917 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte17g01388 | 980 | Pfam | Leucine rich repeat N-terminal domain | 23 | 62 | IPR013210 | - | |
Pte17g01388 | 980 | SUPERFAMILY | RNI-like | 202 | 539 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte17g01388 | Pte-Chr17 | 28544539 | 28551424 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte17g01388 | 92 | 917 | Receptor kinase-like Gene Family | AT5G07180 | 68.803 | 0.0 | 1142 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XIIIb | Pte17g01388 | Pkinase | 1e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte17g01388 | K20718 | - | rcu:8258591 | 1690.24 |