Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01385 ATGGGTGTGAGTCACATGGGAACGAGCGGAGAGTCTGTGTTCGGTGACCCGGGCGCTGGTCCGTCGACGAGCTCCACCGGTGATACATCTGTTCCACGTAGATTTCCATTGGCAGCTCAGCCCGAGATTATGAGAGCTGCTGAGAAGGATGACCAGTACGCTTCTTACGTCTATGAAGCTTGCCGCGACGCTTTCCGCCATCTCTTTGGTACTAGAGTTGCCGTGGCTTATCAGAACGAGACTAAACTTTTGGGCCAGATGCTTTACTATGTACTCACAACTGGTTCTGGATTGCAAACACTTGGAGAGGAATATTGTGACATTACTCAGGTCGCAGGACCTTACGGGCTTCCCCCTACTCCAGCCAGACGTGCCCTTTTCATTGTATATCAGTCAGCAGTTCCGTACCTTGCTGAACGAATTAGCTCCAGGGTTGCTTCTCGTGGAATCATACTTTCTGAATCACTCTCCGATGATATGCACAATGTTAACATTTCAGAAAGAACTAGTTTTCAGCCTCTGGTGACAATTGAGATGTCATCATCTTCCACAACAGTATCACCTGTGTCAGCTCTCACAAGTTTCAAGGGAAAACTAAGTGATTTATGGTCTTCTATGGTTAGAAGATGGCCTACAGTGCTACCTATGGTTCGTGAGGTTTTGCAAATGGTGGTTCGTGCTAATCTCATGTTCTTCTACTTCGAAGGTCTCTACTACCACATATCCAAGCGCGCTTCAGGCATCCGCTATGTTTTCATTGGAAAACCATCAAATCAAAGACCAAAATATCAAATACTAGGAGTTTTTCTACTAATTCAGCTATGCATAATTGGTGCTGAGGGAGTACGGCGGAGTAATCTATCTTCAATTGCAAGTTCAGTTCACCAGGCATCTTTTGGCACCCTGCAGACTTCAACAGGACTTGGTTTGCCAGTTATAAATGAAGAAGGCAAATTGGCATCTGCTGATACTGACAAGGATAGTGGGCCCTCTGACTTCGTACTTTCTGAGTCCCAATCTACTACTAGTTCCAGTAAATGCACGCTCTGCCTTAGCAATCGGCAACACCCTACAGCTACAGCCTGTGGCCATGTATTCTGCTGGAACTGCATCACAGAATGGTGCAATGAAAAGCCGGAATGTCCTCTTTGCCGCACTCCCGTAACACATTCAAGTCTAGTTTGTTTGTATCATTCAGACTTCTAG 1206 0.4619 MGVSHMGTSGESVFGDPGAGPSTSSTGDTSVPRRFPLAAQPEIMRAAEKDDQYASYVYEACRDAFRHLFGTRVAVAYQNETKLLGQMLYYVLTTGSGLQTLGEEYCDITQVAGPYGLPPTPARRALFIVYQSAVPYLAERISSRVASRGIILSESLSDDMHNVNISERTSFQPLVTIEMSSSSTTVSPVSALTSFKGKLSDLWSSMVRRWPTVLPMVREVLQMVVRANLMFFYFEGLYYHISKRASGIRYVFIGKPSNQRPKYQILGVFLLIQLCIIGAEGVRRSNLSSIASSVHQASFGTLQTSTGLGLPVINEEGKLASADTDKDSGPSDFVLSESQSTTSSSKCTLCLSNRQHPTATACGHVFCWNCITEWCNEKPECPLCRTPVTHSSLVCLYHSDF* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01385 401 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 324 398 IPR013083 -
Pte17g01385 401 SMART ring_2 347 384 IPR001841 -
Pte17g01385 401 FunFam Peroxisome biogenesis factor 10 322 398 - -
Pte17g01385 401 CDD RING-HC_PEX10 346 396 - -
Pte17g01385 401 ProSitePatterns Zinc finger RING-type signature. 362 371 IPR017907 -
Pte17g01385 401 SUPERFAMILY RING/U-box 346 390 - -
Pte17g01385 401 PANTHER PEROXISOME ASSEMBLY PROTEIN 10 36 399 IPR025654 GO:0005778|GO:0007031|GO:0008270|GO:0016558
Pte17g01385 401 MobiDBLite consensus disorder prediction 1 34 - -
Pte17g01385 401 Pfam Pex2 / Pex12 amino terminal region 50 284 IPR006845 -
Pte17g01385 401 Pfam Zinc finger, C3HC4 type (RING finger) 345 390 - -
Pte17g01385 401 ProSiteProfiles Zinc finger RING-type profile. 347 385 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01385 347 397 C3H Transcription Factor Family AT4G28270 34.328 1.30e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01385 K13346 - qsa:O6P43_015847 604.364