Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01379 ATGACACCATCAGAATCATTCGATTCTGATTTGATCAACCAACCTAGTTTTGAATTCACTGATGATCAGTACATGGACATGGATGACTGGCTGGAGAAAGATGCTCCCGCGATTTTTGTTTCTGATCCTGCTCAGAATTCAGCTGTTGATTTAGTTGCTGATGTGAATAACCTCGGAGGAAGCAGCCATCAGCATGAAGGCTCTAGCACCAGTAACAGAGGACATGGTGGGGGGAGAGACAACAGAAGATTTGCATTCAAGACAAAGTCTGAGATTGAAGTACTTGATGATGGATTCAAGTGGAGGAAGTATGGGAAGAAGATGGTGAAGAACAGCCCAAATCCGAGGAATTATTACAAGTGCTCGGTGGATGGATGTCTAGTGAAGAAGAGAGTCGAAAGAGATAGAGATGATCCAAGATATGTTATTACGACTTACGAAGGAGTTCATACCCATCCTAGCTAG 465 0.4323 MTPSESFDSDLINQPSFEFTDDQYMDMDDWLEKDAPAIFVSDPAQNSAVDLVADVNNLGGSSHQHEGSSTSNRGHGGGRDNRRFAFKTKSEIEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVDGCLVKKRVERDRDDPRYVITTYEGVHTHPS* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01379 154 Gene3D WRKY domain 82 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte17g01379 154 MobiDBLite consensus disorder prediction 57 82 - -
Pte17g01379 154 SUPERFAMILY WRKY DNA-binding domain 88 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte17g01379 154 MobiDBLite consensus disorder prediction 57 75 - -
Pte17g01379 154 FunFam WRKY transcription factor 57 81 154 - -
Pte17g01379 154 ProSiteProfiles WRKY domain profile. 90 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte17g01379 154 SMART WRKY_cls 95 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte17g01379 154 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 68 153 IPR044810 GO:0003700
Pte17g01379 154 Pfam WRKY DNA -binding domain 96 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01379 Pte-Chr17 28474721 28475822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01379 83 154 WRKY Transcription Factor Family AT5G26170 86.111 8.20e-43 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte17g01379 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01379 - - qsu:112019896 178.718