Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01377 ATGCCAGCTTTTTCTTTTATCCTGATAGCTATGTTGATGGAGATGATGTCTCCAACGGTAGCAGTGCCATATAGAATAGGTAATTCAGTTTGTGATAGTCCAAGCTTAGCTTCCCGTATGGATATTACCAATCTTAAGCTCATGGCAGATGCTGGTTTGTTGTTTGATTCTGTTGCTGAGACTTCTTCTTCCGAGACAGTGGTAATTGTTCATGAGGATTGTAATGGGGGTGATCCAGAAGATAGAATGGGAGGACTTTCTCCTTTGGTTGTAATATCTCAAAATAAAAGCAACTCTGTTGCTGGTGGTGATGATGGCGCGGTAACACAGGAAATTGAGGAGGATGATTCATCATCATTAGATGGGGATCAGATTCTAGATAGCTCTTGTTCTCTTTCATTAGCTAGTGAGAATAGTAGCATGTGTGGAGAGGAGTTCTTGGGCATTGAGGCTACTACTGAGATAGGAGCACCAACTGATGTGCACATTGACAAGAATGTTTCCAGTATAAATATTGTAAGAAAGGCAGGTGAGTTTGGCGATGCCAACATTGAGACGGAAATCCTGAACGTACCCCTTGCTTTGGCAGTGAGCCTTGAGAGAGAAGTTGAGAGAGAAATCGGCAATAGGTCAGACGCAAAGCCAGCTGTTCTCCAGTTGCCTCTGGATAATGGGTCAACCGCTTCAGTTGGCCGTAGTGTCTTTGAGGTTGATTATGAGTCTCTTTGGGGAGTTACATCTATGTGTGGAAGGCGTTCTGAGATGGAGGATGCTGTTGCCACTGTACCACGATTTTTGAAAATTCCCATCCAAATGCTGATTGGTGATAGGATACTTGATGGATTAAACAAGAACATAGCTCACCAGACAATACATTTCTTTGGCGTTTATGATGGCCATGGTGGCTCTCAGGTTGCTAACTACTGCCGGGATAGAATTCATTTGGCTTTGGCCGAAGAAGCAGAATCTGTTCAAGAAGGTCTAATCGATGGAACTGTTAAAGATAGTTGTCAAGATCAGTGGGAAAAGGTATTCACCAATTGTTTCCTGAAAATTGATGCAGAAGTCGGAGGAAATGGTGGTCTGGAACCTATTGCCCCAGAAACAGTTGGTTCCACTGCTGTTGTTGCTGTCATCTGTTCATCTCATATCATAGTAGCAAATTGTGGAGATTCACGGGCAGTACTCTATCGTGGAAAAGAACCCATTGCACTGTCTGTAGATCATAAACCTAATAGAGAAGATGAATATGTGCGGATAGAGGCAGCTGGAGGCAAGGTCATACAGTGGAATGGTCATCGTGTGTTTGGTGTCCTTGCTATGTCAAGGTCCATAGGTGATAAATACTTGAAGCCATGGATCATTCCTGAACCTGAAGTTATGTTTCTTCCACGGGTTAAAGATGACGAATGCCTCATTCTCGCCAGTGATGGTCTATGGGATGTCATGACAAATGATGAGGTTTGTGACATCGCTCGAAAGCGAATACTTCTCTGGCACAAGAAGAATGGTGTCTCGCTACCCACTGAAAGGGATGTAGGAGTTGATCCCGCAGCTCAAGCAGCTGCAGAGTACCTTGCAAACCGTGCACTTAAAAAAGGAAGCAAGGACAACATCACTGTTGTTGTGGTGGATTTGAAAGCTCAAAGGAAATTCAAGAGCAAGGCATAA 1671 0.4375 MPAFSFILIAMLMEMMSPTVAVPYRIGNSVCDSPSLASRMDITNLKLMADAGLLFDSVAETSSSETVVIVHEDCNGGDPEDRMGGLSPLVVISQNKSNSVAGGDDGAVTQEIEEDDSSSLDGDQILDSSCSLSLASENSSMCGEEFLGIEATTEIGAPTDVHIDKNVSSINIVRKAGEFGDANIETEILNVPLALAVSLEREVEREIGNRSDAKPAVLQLPLDNGSTASVGRSVFEVDYESLWGVTSMCGRRSEMEDAVATVPRFLKIPIQMLIGDRILDGLNKNIAHQTIHFFGVYDGHGGSQVANYCRDRIHLALAEEAESVQEGLIDGTVKDSCQDQWEKVFTNCFLKIDAEVGGNGGLEPIAPETVGSTAVVAVICSSHIIVANCGDSRAVLYRGKEPIALSVDHKPNREDEYVRIEAAGGKVIQWNGHRVFGVLAMSRSIGDKYLKPWIIPEPEVMFLPRVKDDECLILASDGLWDVMTNDEVCDIARKRILLWHKKNGVSLPTERDVGVDPAAQAAAEYLANRALKKGSKDNITVVVVDLKAQRKFKSKA* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01377 556 SMART PP2C_4 228 544 IPR001932 -
Pte17g01377 556 Pfam Protein phosphatase 2C 268 539 IPR001932 -
Pte17g01377 556 ProSitePatterns PPM-type phosphatase domain signature. 293 301 IPR000222 GO:0043169
Pte17g01377 556 Gene3D - 228 556 IPR036457 -
Pte17g01377 556 SUPERFAMILY PP2C-like 241 547 IPR036457 -
Pte17g01377 556 CDD PP2Cc 244 546 IPR001932 -
Pte17g01377 556 ProSiteProfiles PPM-type phosphatase domain profile. 242 546 IPR001932 -
Pte17g01377 556 PANTHER PROTEIN PHOSPHATASE 201 546 IPR015655 GO:0004722|GO:0006470
Pte17g01377 556 FunFam Protein phosphatase 2C 16 230 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01377 Pte-Chr17 28467805 28471559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01377 13 557 PP2C-type Phosphatase Gene Family AT1G17550 48.837 5.08e-168 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01377 K14497 - qsa:O6P43_019124 765.377