Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01376 ATGGAGGATCATCAAGAAGAAGAAGTTCTGGGATCCAGCTTGACGATGGAAAAAGTGGCGGCTGCGAAGTCGTACATAGAGAATCATTACAGAGCTCAGATGAAGAACATTCAAGAGCGTAAGGAGAGACGGTGGGTTCTAGAAAGGAAGCTAGCCTCCTCAGATGTGCCAAATGAGGAACGGATCAACCTCATCAAAGATTTAGAGAGGAAAGAAACAGAATTTATGCGGCTAAAGAGGCACAAAATATGTGTTGAAGATTTTGAGCTTTTGACAATCATTGGAAGAGGAGCCTTTGGTGAGGTTCGATTGTGTCAGGAGAAAAAATCTGGCAATATTTATGCCATGAAAAAGCTGAAGAAATCTGAGATGCTTAAGAGAGGCCAGGTGGAACATGTTAAAGCTGAAAGGAACCTGTTGGCAGAAGTTGCGAGCCATTTCATTGTAAAGCTTTACTATTCATTTCAGGATGCTGAGTTCTTGTATTTAGTTATGGAGTATCTTCCTGGTGGTGACATGATGACTTTGTTGATGAGAGAAGATACTTTAACTGAGAATGTGGCTAGATTTTATATTGCTCAGAGTGTCCTGGCTATAGAGTCTATTCACAAACACAATTACATTCACAGAGATATCAAACCTGACAATCTTCTTTTGGACATAAATGGTCATATGAAGCTCTCAGATTTTGGCCTTTGCAAGCCGATCGATTGCAGAACTCTATTTACACTACATGAAAACAGACCATTGGATGATTCAAATTCAACTGGGCCTATGGAAGTTGATGGCTGTTTTCCGGATGCAGACAACAGGAGTAACTGGAAAAGTGCACACGAACAGCTCCAACATTGGCAGATGAACAGGAGAAAGTTGGCATTTTCAACTGTGGGGACACCAGACTATATTGCACCTGAAGTATTACTGAAGAAAGGATATGGGATGGAATGTGACTGGTGGTCACTGGGAGCAATAATGTATGAAATGCTTGTTGGTTATCCTCCATTTTACTCAGATGAGCCGCTGACTACTTGTAGAAAGATTGTTCATTGGAGAAATCATTTGAAATTTCCAGAAGATGCAAGGATGACAAATGAAGCCAAAGATCTTATTTGCAGGTTGCTTTGTGATGTGGAGCACAGGCTTGGTACAGGAGGGGCCAATCAAATCAAGGCTCATCCTTGGTTCAAGGGTGTTGAGTGGGATAAACTTTATGAGAAGGAAGCAGCTTTTAAACCGCAAGTGAACGGGGAGCTGGATACTCAAAACTTTATGAAGTTTGATGAAGTGGATCCACCAATATCAGCAAGAACTGGATCTGGACAAACACGAAAGATGCTGACGTCAAAAGACCTAAACTTTGTTGGCTACACTTACAAGAATTTTGATGCCTTAAAAGCACTTCATACATCTTTCGATGCTACATCAAGTGGATCGCCTAGGAAGCCTTCCATTCAAACCATATTTAGTGATACAAGACCAGATAGTTCTACTAATCCAGTAGCTGAGGACACAGGATTACAGGTGTTTGCATCATCTGGGGATCCAATGGTGCCATAA 1557 0.4143 MEDHQEEEVLGSSLTMEKVAAAKSYIENHYRAQMKNIQERKERRWVLERKLASSDVPNEERINLIKDLERKETEFMRLKRHKICVEDFELLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLKRGQVEHVKAERNLLAEVASHFIVKLYYSFQDAEFLYLVMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDINGHMKLSDFGLCKPIDCRTLFTLHENRPLDDSNSTGPMEVDGCFPDADNRSNWKSAHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPLTTCRKIVHWRNHLKFPEDARMTNEAKDLICRLLCDVEHRLGTGGANQIKAHPWFKGVEWDKLYEKEAAFKPQVNGELDTQNFMKFDEVDPPISARTGSGQTRKMLTSKDLNFVGYTYKNFDALKALHTSFDATSSGSPRKPSIQTIFSDTRPDSSTNPVAEDTGLQVFASSGDPMVP* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01376 518 Pfam Protein kinase C terminal domain 414 458 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pte17g01376 518 FunFam Non-specific serine/threonine protein kinase 49 171 - -
Pte17g01376 518 ProSiteProfiles Protein kinase domain profile. 88 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01376 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Pte17g01376 518 Gene3D Phosphorylase Kinase; domain 1 86 171 - -
Pte17g01376 518 Gene3D Phosphorylase Kinase; domain 1 414 424 - -
Pte17g01376 518 FunFam Non-specific serine/threonine protein kinase 294 413 - -
Pte17g01376 518 SUPERFAMILY Protein kinase-like (PK-like) 72 445 IPR011009 -
Pte17g01376 518 CDD STKc_NDR_like 86 459 - -
Pte17g01376 518 CDD MobB_NDR_LATS-like 22 83 - -
Pte17g01376 518 SMART serkin_6 88 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01376 518 FunFam Non-specific serine/threonine protein kinase 172 239 - -
Pte17g01376 518 PANTHER SERINE/THREONINE-PROTEIN KINASE 12 445 - -
Pte17g01376 518 ProSiteProfiles AGC-kinase C-terminal domain profile. 396 468 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte17g01376 518 SMART pkinase_C_6 396 460 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte17g01376 518 Pfam Protein kinase domain 287 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01376 518 Pfam Protein kinase domain 89 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01376 518 Gene3D Transferase(Phosphotransferase) domain 1 290 413 - -
Pte17g01376 518 Gene3D Transferase(Phosphotransferase) domain 1 172 242 - -
Pte17g01376 518 MobiDBLite consensus disorder prediction 472 518 - -
Pte17g01376 518 FunFam Non-specific serine/threonine protein kinase 414 424 - -
Pte17g01376 518 MobiDBLite consensus disorder prediction 472 505 - -
Pte17g01376 518 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01376 Pte-Chr17 28458884 28464905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01376 1 471 AGC Kinase Gene Family AT4G33080 80.585 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pte17g01376 Pkinase 7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01376 K08790 - cit:102627835 895.19