Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01369 ATGTATGCGTCGGTAGATGTCGATGCTGATGGCAACGACCCCAACTCATACTGGACCCAGCTGCTATTTCTCTGCAGCCCTTTTGCAAATGAGGCCGCCGCAAACGAGAACCCTTCGCCGTCTTTATCCGTAACTGACTTCCATTTCCCCTTTGAAGATCATGTTGATTTCATTTTCAATGACCTTTTCTTTGAGCATCAACTTTTAGCTGATCAGGAAGCTGACGGTCATCAGATTACTGATCAGATCGAGGTTTCAAACAGAATTGACGAAACGGACCAACATGTCATAGAAAATTATCCTGACTATGATTACCAGAAGCAGCGGCAGCAGATACCAATAAAAAGACCATCTAAGAGAGATCGCCACACTAAGATCAAAACGGCTAATGGGCTAAGAGATCGCAGAATGAGATTGTCTCTTGAAGTTTCCAGGAGATTCTTTCGTTTGCAAGATATGTTGCGATTCGATAAGGCAAGCAAAACGATTGACTGGTTACTCAATCAAGCCAAGGATGAGATTGAGCGGCTTGAAAGAGAGAACAATGTCCTGACAAGTAGCAGTGCTGGTGTTAAGAATGTGTCTTCGACTTCAGAATGCGAAGGTGTATCTGGGTTGGATGAAGTCACTGGCACGGGTGGAAATAACAAACAAGATGAGGTGAAGTCTTCAGTACTGAAAGAAAGAAGAATCAAACGGTCTCGCAAGATTTTTCTCGAACCTCGGCCAAAGGAGGATAGAGCAAAAGCAAGAGCAAGAGCCAGAGAGAGGACAAAGGAAAAGATTATGAGAAGCAAGAAATTTGTACAGGAGGATTCGAGGTATAGTGCTGAGGCAACAAATCACAAACCTCAAATATTTGGAGAAGAATCCCATACCTCATGCCGAAGCAACATTAGTCACTCGTTGGATGAGATGGTCAACGATGAAGAACGAAGATTTCATGCAAAGGAACAATCTGGGGCTTCATATGAGCAATCCTCGGCAAAACATCAGTCTGCAGAGCTGCAGTATTTGCACAAGCCATGGGAGGCCTACAGCATTCTCAACTAA 1053 0.4397 MYASVDVDADGNDPNSYWTQLLFLCSPFANEAAANENPSPSLSVTDFHFPFEDHVDFIFNDLFFEHQLLADQEADGHQITDQIEVSNRIDETDQHVIENYPDYDYQKQRQQIPIKRPSKRDRHTKIKTANGLRDRRMRLSLEVSRRFFRLQDMLRFDKASKTIDWLLNQAKDEIERLERENNVLTSSSAGVKNVSSTSECEGVSGLDEVTGTGGNNKQDEVKSSVLKERRIKRSRKIFLEPRPKEDRAKARARARERTKEKIMRSKKFVQEDSRYSAEATNHKPQIFGEESHTSCRSNISHSLDEMVNDEERRFHAKEQSGASYEQSSAKHQSAELQYLHKPWEAYSILN* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01369 350 MobiDBLite consensus disorder prediction 195 224 - -
Pte17g01369 350 Pfam TCP family transcription factor 118 263 IPR017887 -
Pte17g01369 350 MobiDBLite consensus disorder prediction 313 334 - -
Pte17g01369 350 MobiDBLite consensus disorder prediction 320 334 - -
Pte17g01369 350 Coils Coil 160 187 - -
Pte17g01369 350 MobiDBLite consensus disorder prediction 195 220 - -
Pte17g01369 350 ProSiteProfiles R domain profile. 244 261 IPR017888 -
Pte17g01369 350 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 96 300 IPR005333 GO:0003700
Pte17g01369 350 ProSiteProfiles TCP domain profile. 119 177 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01369 Pte-Chr17 28365168 28366816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01369 30 258 TCP Transcription Factor Family AT3G18550 33.745 1.54e-27 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte17g01369 TCP 4.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01369 - - qsa:O6P43_023000 194.897