Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01362 ATGGACACAAGTCGTGCATCCCGGGCCGGAGTTGACCCGAGAGTTCGACAAGTCGGTTTTGTTACTCTCAGGGATCCACCACCGTCTCGGACTGAAATCGCTCAAGTTAATTCCGGGACGTTTCAGCTTTCTGATTCACCAATTAATAATTCTCTATCTCCGGTTATGATTCCACCTCCGAGGCATCTTCCTGACCGAACGCCCGCCGTTCCTGTTCCCGGTTCTGGCTTCCGTAGGCAGGACTCCGGCGATCATTTACAAGTCGGGAGCTATAACCCCATGGAGTCGTTGCTTGGATCGTCTCTCGTGCAGTCTCCGTCAAGTCGGATTGGTGTTGGTGACGAGGAGTTCTCCGAAGAGTCGAATTCTAATATGGGATGGTTCCGTCGAAGTGATTCAGGAAAGTTATCGTCGAGTTTTCCAAGCGGAGGATTTGATTTGACGAAAGCCAAAGCACCTGAGAATCCTGGTGAGGATGCGAATAAATCACTCGGAGCTCCAGTCTGTATACACACGATAAACCATGAATTGGCAGAAAAGAGCGGTGTGAATGTTCACTGTGATAAATCATCAGGTTCAAAGCCGCTGAAAGCTAAAACTACAAAGGCTGATAGGCGTGCCTTGCAGGAGGCACAGCGAGCTGCAAAATCTATCGCAAAAGGTCCTGGCAAAACATCTAAGAAGCCTTTGCAAAAGAAGGATGCTCCTACGGTTGGATCTGCATCAGTAGGTATTGAGAAGAAACGGACTGATGGACCAGCAGAAAAAGATAGGAAGAAAGACGTCCCTCCTCCTCGAATGCAATTTGATGACAGAAGCCGGGTGGAAAAGGCTAAAAGGCGTGCAGTAGTTAGTCAAACTGAGGCTAAAAACAGAGTGGAATTATTCCGACATTTGCCTCAATATGAGCATGGGTCTCTGCTTCCTGATCTGGAGTTGAGATTTTTCCAACTTGAATCGGTGCATCCTGCTGTATATAAGGTTGGATTGCAGTATTTGCATGGAGACATATCTGGGGGTAATGCGCGTTGCATTGCCATGTTAAAAGCTTTTCAGGAAGCCATTAAAGATTATTCTACTCCACCTGAAAAAACACTTAATAGAGATCTGACTGCAAGAATCAGCAGTTATGTATCGTTCTTTATTGAATGTAGGCCTCTTTCTGTTAGCATGGGAAATGCTATTAGGTTTATTAAAAGTCGTATTGCCAAATTACAATTGTCACAGTCCGAGTCTGAAGCAAAAGCTGTCCTTTGTGCTGATATTGACGGTTTCATAAATAACAAGATAATTATTGCTGATAAGGTAATTGTTGAACATGCTACTACAAAGGTTATGGATGGTGATGTCATTCTCATATATGGGTCGTCATGCATCGTTGAGAATATTCTTTTGCATGCCCACGAGCAAGGAAAACAGTTTCTCGTTGTGGTTGTGGACTCACGTCCAAAGCTTGAAGGCCAGGCCTTACTCCGGAGGCTGGTGGCACGGGGCCTGAGTTGTGCATATACTCATATAAATGCTGTTTCTTACATAATGCATGAGGTCACACGAGTTCTTTTAGGAGCTTCTGCTGTTCTATCTAATGGAACAATATATTCTAGGGTTGGTACTGCATGTGTTGCTATGGTGGCCCATGCATTCCAAGTTCCTGTCTTGGTCTGCTGTGAAGCATATAAATTTCACGAAAGAGTGCAACTTGATTCTATTTGTTCAAATGAACTAGGTGATCCAGATGCAGTTGCCAAGGTATCCGCAAGAGAAGATGTGAATTATTTAGGGAATTGGACCAGAAATGCAAATTTGCAACTCCTGAATTTGACGTATGATGCAACGCCATCTGATTATGTGTCAATGATCGTTACAGATTATGGCATGATCCCTCCTTCTAGTGTTCCCGTCATTCTGCGTGAATATCTATTAAGAGAGTATTTGTTGATTTAG 1944 0.4419 MDTSRASRAGVDPRVRQVGFVTLRDPPPSRTEIAQVNSGTFQLSDSPINNSLSPVMIPPPRHLPDRTPAVPVPGSGFRRQDSGDHLQVGSYNPMESLLGSSLVQSPSSRIGVGDEEFSEESNSNMGWFRRSDSGKLSSSFPSGGFDLTKAKAPENPGEDANKSLGAPVCIHTINHELAEKSGVNVHCDKSSGSKPLKAKTTKADRRALQEAQRAAKSIAKGPGKTSKKPLQKKDAPTVGSASVGIEKKRTDGPAEKDRKKDVPPPRMQFDDRSRVEKAKRRAVVSQTEAKNRVELFRHLPQYEHGSLLPDLELRFFQLESVHPAVYKVGLQYLHGDISGGNARCIAMLKAFQEAIKDYSTPPEKTLNRDLTARISSYVSFFIECRPLSVSMGNAIRFIKSRIAKLQLSQSESEAKAVLCADIDGFINNKIIIADKVIVEHATTKVMDGDVILIYGSSCIVENILLHAHEQGKQFLVVVVDSRPKLEGQALLRRLVARGLSCAYTHINAVSYIMHEVTRVLLGASAVLSNGTIYSRVGTACVAMVAHAFQVPVLVCCEAYKFHERVQLDSICSNELGDPDAVAKVSAREDVNYLGNWTRNANLQLLNLTYDATPSDYVSMIVTDYGMIPPSSVPVILREYLLREYLLI* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01362 647 MobiDBLite consensus disorder prediction 117 144 - -
Pte17g01362 647 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 48 639 - -
Pte17g01362 647 MobiDBLite consensus disorder prediction 192 211 - -
Pte17g01362 647 MobiDBLite consensus disorder prediction 184 283 - -
Pte17g01362 647 MobiDBLite consensus disorder prediction 53 67 - -
Pte17g01362 647 MobiDBLite consensus disorder prediction 248 283 - -
Pte17g01362 647 SUPERFAMILY NagB/RpiA/CoA transferase-like 292 639 IPR037171 -
Pte17g01362 647 MobiDBLite consensus disorder prediction 85 108 - -
Pte17g01362 647 Pfam Initiation factor 2 subunit family 337 629 IPR000649 GO:0044237
Pte17g01362 647 MobiDBLite consensus disorder prediction 38 164 - -
Pte17g01362 647 MobiDBLite consensus disorder prediction 38 52 - -
Pte17g01362 647 Gene3D - 432 640 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01362 Pte-Chr17 28322651 28326927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01362 1 648 Eukaryotic Initiation Factors Gene Family AT5G38640 59.347 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01362 K03680 - qsa:O6P43_022993 893.264