Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01358 ATGTTATTTATAAAACAGGTTCTTGGGTTTGGGGAGTACATTGAAGAAGTCTATGCTGCATACGAACAGCACAAACTGGAGACCATGGACTCCTTGAGGGGCGGCAAGTGGAGCAATGGTGCTGAGATGACCGAGGAAGAAGCATTAGCTGAACAGCAGCGGATGTTTGCAGAGGCACGTGCCAGAATGAATGGCGAGGTTGCATCTAAGCAGCCAGATCCCCATCAAAGTTTAGAAAGCTGA 243 0.4815 MLFIKQVLGFGEYIEEVYAAYEQHKLETMDSLRGGKWSNGAEMTEEEALAEQQRMFAEARARMNGEVASKQPDPHQSLES* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01358 80 PANTHER PROTEIN DR1 HOMOLOG 6 79 IPR044255 -
Pte17g01358 80 Gene3D Histone, subunit A 4 71 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01358 Pte-Chr17 28305241 28306058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01358 6 73 CCAAT-DR1 Transcription Factor Family AT5G23090 78.261 1.93e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01358 K21751 - csav:115709923 130.954