Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01345 ATGGCTCAAGATGGTTCTTCCGTTGCTGACTCACCTCGGAGACGCTCTGGACTCTTGCGGGACCAAGTCCAAGTAATTAAAAGAAAGGACTCTGATCGCTATGAAATTGTGCCAATTCAAGACCCTTTGTCGTTTGAGAAAGGTTTCTTCATTGTGATTCGCGCATGCCAGTTACTGGCTCAAAAGAATGATGGGATGATAATGGTAGGAGTTGCAGGACCCTCTGGAGCAGGGAAAACTGTGTTCACTGAGAAAGTTCTCAACTTCATGCCCAGCGTTGCAGTCATTACAATGGACAACTACAATGATTCTAGTCGAATTATTGATGGAAACTTCGATGATCCTCGACTGACAGATTATGAGACGTTGCTCCAGAACATACATGATCTTAAAGCAGGGAAACCTGCTCAGGTTCCAATATATGATTTCAAGTCTAGCTGTCGCATAGGTTACAGGACTCTTGAAGTTCCCAGCTCTCGTATTGTATTCATAGAGGGCATCTATGCCTTGAATGTAAAATTGAGGCCTCTGCTGGATCTTCGTGTGTCTGTAACTGGTGGAGTCCACTTTGACCTTGTTAAGCGGGTTTTAAGGGACATTCAACGTGTTGGTCAAGAGCCTGAAGAGATAATTCATCAAATCTCTGAAACGGTGTACCCCATGTATAAGGCTTTTATTGAACCAGATCTTCAAACAGCACATATCAAAATCATCAATAAGTTTAATCCCTTTTCTGGCTTCCAGAATCCTACTTACATATTGAAGTCAACAAGGGATGTGACTGTCGATCAAATAAAGGCTGTTGTTGCTGATGGTTATACTGAAACAACTGAGGAAACCTATGATATCTATCTCTTACCACCAGGTGAAGATCCTGAGGCTTGTCAATCTTATCTGAGGATGAGGAACCGGGATGGGAAGTATAATCTCATGTTTGAGGAATGGGTAACAGACAGTCCATTCATAATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGTCTTCTTGGAGGTCTGATGGCATTGGGATACACGATAGCAGCTATCTTGAAAAGAACCAGCCATATTTTCTTTGATGATAGGGTCTGTGTGAAAACTGATTGGTTGGAACAACTCAATCGTCAATATGTTCAGGTGCAAGGAAAAGATCGCAATTATGTTGAACATGTAGCTGACAGACTGGGGCTGGAAGGTTCTTACGTTCCGCGTACTTACATTGAACAAATTCAACTTGAGAAGCTTGTGAACGATGTTATGGCATTGCCAGCTGATCTAAAAACGAAACTCAGCATTGATGATGATTTGGTTTCAAGTCCTAAAGAAGCACTTTCAAGAGCATCTGCTGACAGAAGGATGAAGTATCTGAATCGTTCTCAGTCGTATAATCAAAGGGAGAAGCACCTGTCAAAGTTGACAAGGCTTGCTATAAATAACAGAAGATTTGATGGGCGGAATTTAGACTCTCCAGCACCAGTTGCAAACCAGGGCGTTATTACTCAACTTTCAGACCAGATTTCTACATTAAACGAGAGAATGGATGAATTCACATCTCGTATCGAGGAGTTGAATTCGAAGTTCCGAAGTGTTTCTGCTAGTCAACAAAACCTGGCTTTACAGGCAGAAGCGTGTAGTGCTACTGGATCCGCTCTGTTTATGCCTGGAATAACCAATGGCTCATTGACTGCACCACTGTTGCCCCATTCTTCATCGTCTTCGCAGTTGGCCAGAGAGTCCCCCCTGATGGAAGAGATTCTTGTCATTGCTCGGGCACAACGTCAGATCATGCATCAGATAGACAACTTGAGCAATCTTCTGCATGAGTACCGGGGAGAAAGGTCACGAGAAGGAAGAACAAATCAAGCAAGCAGAATGTCTGTTGCGGAATTCATTACCATCCCCTTCCTTTTGACATTGGCAGTTGGCGGTTTAGGTGTGTTTTTGTTCAAAACTCGTTCCCAAAAGTGA 1965 0.43 MAQDGSSVADSPRRRSGLLRDQVQVIKRKDSDRYEIVPIQDPLSFEKGFFIVIRACQLLAQKNDGMIMVGVAGPSGAGKTVFTEKVLNFMPSVAVITMDNYNDSSRIIDGNFDDPRLTDYETLLQNIHDLKAGKPAQVPIYDFKSSCRIGYRTLEVPSSRIVFIEGIYALNVKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPTYILKSTRDVTVDQIKAVVADGYTETTEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRTSHIFFDDRVCVKTDWLEQLNRQYVQVQGKDRNYVEHVADRLGLEGSYVPRTYIEQIQLEKLVNDVMALPADLKTKLSIDDDLVSSPKEALSRASADRRMKYLNRSQSYNQREKHLSKLTRLAINNRRFDGRNLDSPAPVANQGVITQLSDQISTLNERMDEFTSRIEELNSKFRSVSASQQNLALQAEACSATGSALFMPGITNGSLTAPLLPHSSSSSQLARESPLMEEILVIARAQRQIMHQIDNLSNLLHEYRGERSREGRTNQASRMSVAEFITIPFLLTLAVGGLGVFLFKTRSQK* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01345 654 PRINTS Uridine kinase signature 225 238 - -
Pte17g01345 654 PRINTS Uridine kinase signature 133 148 - -
Pte17g01345 654 PRINTS Uridine kinase signature 66 83 - -
Pte17g01345 654 PRINTS Uridine kinase signature 189 199 - -
Pte17g01345 654 ProSiteProfiles CYTH domain profile. 249 411 IPR023577 -
Pte17g01345 654 Gene3D - 66 247 IPR027417 -
Pte17g01345 654 CDD UMPK_like 69 240 - -
Pte17g01345 654 Coils Coil 498 525 - -
Pte17g01345 654 SUPERFAMILY CYTH-like phosphatases 266 408 IPR033469 -
Pte17g01345 654 Pfam Phosphoribulokinase / Uridine kinase family 69 237 IPR006083 GO:0005524|GO:0016301
Pte17g01345 654 Pfam CYTH domain 269 405 IPR023577 -
Pte17g01345 654 Coils Coil 587 607 - -
Pte17g01345 654 Gene3D - 255 414 - -
Pte17g01345 654 PANTHER URIDINE KINASE 18 424 - -
Pte17g01345 654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 239 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01345 Pte-Chr17 28216497 28221251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01345 68 237 PRT Gene Family AT5G40870 27.933 7.95e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01345 K00876 - cave:132183878 1073.92