Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01343 ATGGGTTGTTCATTCTCGGGGTTGAATGCGCTATACGACGCCGTAAACGGAGGTGGAGACGTGTGGATCAACGATAATCGGTTCCGCATCGTGAGGCAGCTAGGAGAAGGTGGATTCGCCTATGTCTACTTGGTGAAGGAGGTGGTTGCCGACAATTCCGCTGCTGGTGGAGGTCTTGCCAAGAAAGTGAAGGACACTTCTCATCTCTCTGACAATGGAACTTATGCCATGAAGAAGGTTCTTATTCAGAATAGTGAACAGTTGGAACTGGTGAGGGAGGAGATCCGTGTCTCTTCGTTGTTCAATCATGCCAATCTGCTTCCCCTACTTGATCACGCTATCATTTCTGTCAAGCCTACCCAGGAAAGCTCTTGGACACATGAAGCATACTTACTGTTTCCTGTTCATTTGGATGGAACATTGCTGGATAATGCCACAGCTATGAAAGCTAAAAAGGAGTTCTTCTCTACTTCCGATGTCCTTCGAATATTCCGGCAGCTTTGTGCAGGACTAGAGCACATGCACAACCTTGATCCTCCTTATGCACATAATGATGTCAAACCTGGTAATATTCTCATTACTCACAGGACAGGAAAAGCACCTCTTGCCATATTGATGGATTTTGGAAGTGCTCGACCTGGTAGAAGACAGATTCGGTCCAGATCAGAGGCACTTCAATTGCAGGAATGGGCGTCTGAACATTGCTCTGCTCCTTTCCGAGCTCCTGAACTGTGGGACTGCCCTAGTCATGCTGATATAGATGAGCGAACTGATATTTGGTCATTAGGATGCACATTATATGCAATAATGTACGGCGTGTCTCCATTTGAATATGCGCTTGGAGAATCTGGAGGAAGCCTGCAATTGGCAATTATAAATGCCCAGGTCAAGTGGCCAGCTGGACCTAAGCCTGCGTACCCGGAGGCTCTTCATCAGTTCGTCACTTGGATGCTTCAGCCTCAGGCTGCAGTGCGCCCAAGAATCGATGATATCATAATTCATGTTGACAAATTGATTGCGAAGTTCTCTGATTGA 1035 0.4686 MGCSFSGLNALYDAVNGGGDVWINDNRFRIVRQLGEGGFAYVYLVKEVVADNSAAGGGLAKKVKDTSHLSDNGTYAMKKVLIQNSEQLELVREEIRVSSLFNHANLLPLLDHAIISVKPTQESSWTHEAYLLFPVHLDGTLLDNATAMKAKKEFFSTSDVLRIFRQLCAGLEHMHNLDPPYAHNDVKPGNILITHRTGKAPLAILMDFGSARPGRRQIRSRSEALQLQEWASEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIINAQVKWPAGPKPAYPEALHQFVTWMLQPQAAVRPRIDDIIIHVDKLIAKFSD* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01343 344 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 342 - -
Pte17g01343 344 SUPERFAMILY Protein kinase-like (PK-like) 20 334 IPR011009 -
Pte17g01343 344 Pfam Protein kinase domain 56 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01343 344 Gene3D Transferase(Phosphotransferase) domain 1 16 343 - -
Pte17g01343 344 ProSiteProfiles Protein kinase domain profile. 28 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01343 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Pte17g01343 344 SMART serkin_6 28 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01343 344 ProSitePatterns Protein kinases ATP-binding region signature. 34 62 IPR017441 GO:0005524
Pte17g01343 344 CDD STKc_16 27 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01343 Pte-Chr17 28187485 28192216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01343 33 334 EF-hand Containing Proteins AT4G04710 24.194 2.51e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Pte17g01343 Pkinase 3.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01343 K08856 - mnt:21388794 637.876